Bacteroides thetaiotaomicron VPI-5482A |
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Putative Bacteroides thetaiotaomicron VPI-5482A RM systems
Ref: Campbell,D.E. et al. unpublished
REBASE ref # 35521
Complete sequence: 6,254,757 bp
GenBank #: CP083684
REBASE acronym: Bth5482A
Org_num: 62831
All begin KP721_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 9430 | site-specific integrase | |||
| 9435 | S | S2.Bth2079ORF12690P (97% identity) | S4.Bth5482AORF9460P | |
| 9440 | S | S4.Msa17ORFB2P (46% identity) | S3.Bth5482AORF9460P | |
| 9445 | S | S1.Msa17ORFB2P (45% identity) | S2.Bth5482AORF9460P | |
| 9450 | S | S1.Msa17ORFB2P (52% identity) | S1.Bth5482AORF9460P | |
| 9455 | virulence RhuM family protein | |||
| 9460 | M | M.Msa17ORFB2P (100% identity) | M.Bth5482AORF9460P | |
| 9465 | DUF262 domain-containing HNH endonuclease family | |||
| 9470 | DUF5655 domain-containing protein | |||
| 9475 | R | Msa17ORFB2P (100% identity) | Bth5482AORF9460P | |
| 9480 | helix-turn-helix domain-containing protein | |||
| 9525 | DNA-binding protein | |||
| 9530 | S | S4.Bth264aORF11580P (100% identity) | S4.Bth5482AORF9555P | |
| 9535 | tyrosine-type recombinase/integrase | |||
| 9540 | S | S3.BthVORF4518P (100% identity) | S3.Bth5482AORF9555P | |
| 9545 | S | S4.Bth2079ORF12590P (86% identity) | S2.Bth5482AORF9555P | |
| 9550 | S | S1.BthVORF4518P (100% identity) | CCAYNNNNNNRTTT | S1.Bth5482AORF9555P |
| 9555 | M | M.Msa17ORFY1P (100% identity) | M.Bth5482AORF9555P | |
| 9560 | R | Msa17ORFY1P (100% identity) | Bth5482AORF9555P | |
| 9565 | DUF262 domain-containing HNH endonuclease family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4130 | transposase | |||
| 4135 | RM | Msa17ORFE1P (97% identity) | Bth5482AORF4135P | |
| 4140 | 55 aa hypothetical protein | |||
| 10725 | AraC family transcriptional regulator | |||
| 10730 | M | M.Msa17ORFTP (100% identity) | RGATCY | M.Bth5482AORF10730P |
| 10735 | DGQHR domain-containing protein | |||
| 11990 | helix-turn-helix transcriptional regulator | |||
| 11995 | M | M.Msa17ORFGP (100% identity) | M.Bth5482AORF11995P | |
| 12000 | ATP-binding protein | |||
| 15440 | phospholipase D-like domain-containing protein | |||
| 15445 | RM | Bth2079ORF13150P (100% identity) | Bth5482AORF15445P | |
| 15450 | Eco57I restriction-modification methylase | |||
| 21655 | AAA family ATPase | |||
| 21660 | M | M.Pvu626ORF9540P (100% identity) | M.Bth5482AORF21660P | |
| 21665 | 455 aa hypothetical protein | |||