Tolypothrix species PCC 7712 |
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Putative Tolypothrix species PCC 7712 RM systems
Ref: Bozan,M. et al. unpublished
REBASE ref # 35448
| Sequence length: | GenBank #: | |
| Chromosome: | 9,007,860 bp | CP063785 |
| plasmid unnamed13: | 31,341 bp | CP063798 |
| plasmid unnamed5: | 57,284 bp | CP063790 |
| plasmid unnamed8: | 42,150 bp | CP063793 |
REBASE acronym: Tsp7712
Org_num: 63222
All begin HGR01_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8050 | 54 aa hypothetical protein | |||
| 8055 | M | M.Tsp7601aORF10575P (100% identity) | M.Tsp7712ORF8055P | |
| 8060 | transposase | |||
| 10805 | electron transporter | |||
| 10810 | R | Tsp7601aORF7530P (100% identity) | Tsp7712ORF10850P | |
| 10815 | DUF4351 domain-containing protein | |||
| 10820 | type II toxin-antitoxin system VapC family | |||
| 10825 | type II toxin-antitoxin system Phd/YefM family | |||
| 10830 | S | S.Tsp7601aORF7530P (100% identity) | S.Tsp7712ORF10850P | |
| 10835 | DUF3368 domain-containing protein | |||
| 10840 | UPF0175 family protein | |||
| 10845 | UPF0175 family protein | |||
| 10850 | M | M.Tsp7601aORF7530P (100% identity) | M.Tsp7712ORF10850P | |
| 10855 | mercuric reductase | |||
| 11475 | 65 aa hypothetical protein | |||
| 11480 | M | M.Tsp7601aORF6895P (100% identity) | M.Tsp7712ORF11480P | |
| 11485 | 51 aa hypothetical protein | |||
| 11490 | PD40 domain-containing protein | |||
| 11495 | type II toxin-antitoxin system HicB family | |||
| 11500 | type II toxin-antitoxin system HicA family | |||
| 11505 | plasmid pRiA4b ORF-3 family protein | |||
| 11510 | S | S1.Tsp7601aORF6895P (100% identity) | S1.Tsp7712ORF11480P | |
| 11515 | TniQ family protein | |||
| 11520 | AAA family ATPase | |||
| 11525 | DDE-type integrase/transposase/recombinase | |||
| 11530 | S | S2.Tsp7601aORF6895P (100% identity) | S2.Tsp7712ORF11480P | |
| 11535 | R | Tsp7601aORF6895P (100% identity) | Tsp7712ORF11480P | |
| 11540 | AAA-like domain-containing protein | |||
| 29610 | DUF3854 domain-containing protein | |||
| 29615 | R | Tsp7601aORF24900BP (100% identity) | Tsp7712ORF29650BP | |
| 29620 | 129 aa hypothetical protein | |||
| 29625 | ISKra4 family transposase | |||
| 29630 | R | Tsp7601aORF24900AP (100% identity) | Tsp7712ORF29650AP | |
| 29635 | S | S.Tsp7601aORF24900P (100% identity) | S.Tsp7712ORF29650P | |
| 29640 | HigA family addiction module antidote protein | |||
| 29645 | killer suppression protein HigA | |||
| 29650 | M | M2.Tsp7601aORF24900P (100% identity) | M2.Tsp7712ORF29650P | |
| 29655 | M | M1.Tsp7601aORF24900P (100% identity) | M1.Tsp7712ORF29650P | |
| 29660 | 315 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3435 | 89 aa hypothetical protein | |||
| 3440 | M | M.Tsp7601aORF15310P (100% identity) | CGATCG | M.Tsp7712ORF3440P |
| 3445 | 399 aa hypothetical protein | |||
| 4005 | DUF751 family protein | |||
| 4010 | M | M.Tsp7601aORF14730P (100% identity) | GATC | M.Tsp7712ORF4010P |
| 4015 | 158 aa hypothetical protein | |||
| 4200 | translational GTPase TypA | |||
| 4205 | M | M.Tsp7601aORF14525P (100% identity) | TGCGCA | M.Tsp7712ORF4205P |
| 4210 | R | Tsp7601aORF14525P (100% identity) | TGCGCA | Tsp7712ORF4205P |
| 4215 | C | C.Tsp7601aORF14525P (100% identity) | C.Tsp7712ORF4205P | |
| 4220 | bifunctional (p)ppGpp | |||
| 5315 | helicase | |||
| 5320 | RM | Tsp7601aORF13390P (100% identity) | Tsp7712ORF5320P | |
| 5610 | DEAD/DEAH box helicase | |||
| 5615 | RM | Tsp7601aORF13095P (100% identity) | Tsp7712ORF5615P | |
| 5620 | Rpn family recombination-promoting | |||
| 5770 | 211 aa hypothetical protein | |||
| 5775 | M | M.Tsp7601aORF12935P (100% identity) | GTCGAC | M.Tsp7712ORF5775P |
| 5780 | R | Tsp7601aORF12935P (100% identity) | GTCGAC | Tsp7712ORF5775P |
| 5785 | 160 aa hypothetical protein | |||
| 7175 | Uma2 family endonuclease | |||
| 7180 | M | M.Tsp7601aORF11495P (100% identity) | M.Tsp7712ORF7180P | |
| 7185 | photosynthetic/respiratory NAD(P)H-quinone | |||
| 12170 | high light inducible protein | |||
| 12175 | M | M.Tsp7601aORF6185P (100% identity) | GGCC | M.Tsp7712ORF12175P |
| 12180 | anthranilate phosphoribosyltransferase | |||
| 14370 | deoxyribose-phosphate aldolase | |||
| 14375 | M | M.Tsp7601aORF3965P (100% identity) | M.Tsp7712ORF14375P | |
| 14380 | DUF697 domain-containing protein | |||
| 16545 | cyanase | |||
| 16550 | M | M.Tsp7601aORF1755P (100% identity) | CAGCTG | M.Tsp7712ORF16550P |
| 16555 | 70 aa hypothetical protein | |||
| 19690 | DNA phosphorothioation-associated putative | |||
| 19695 | M | M.Fdi3275DndEP (100% identity) | M.Tsp7712DndEP | |
| 19700 | GIY-YIG nuclease family protein | |||
| 19705 | 82 aa hypothetical protein | |||
| 19710 | M | M.Fdi3275DndDP (100% identity) | M.Tsp7712DndDP | |
| 19715 | 145 aa hypothetical protein | |||
| 22720 | 86 aa hypothetical protein | |||
| 22725 | M | M.Tsp7601aORF31965P (100% identity) | GGWCC | M.Tsp7712ORF22725P |
| 22730 | R | Tsp7601aORF31965P (100% identity) | GGWCC | Tsp7712ORF22725P |
| 22735 | sensor histidine kinase | |||
| 27120 | ribonuclease J | |||
| 27125 | M | M.Tsp7601aORF27505P (100% identity) | GCTNAGC | M.Tsp7712ORF27125P |
| 27130 | R | Tsp7601aORF27505P (100% identity) | GCTNAGC | Tsp7712ORF27125P |
| 27135 | anion transporter | |||
| 28310 | sucrase ferredoxin | |||
| 28315 | RM | Tsp7601aORF26295P (100% identity) | Tsp7712ORF28315P | |
| 28320 | Uma2 family endonuclease | |||
| 29565 | 102 aa hypothetical protein | |||
| 29570 | RM | Tsp7601aORF24985P (100% identity) | Tsp7712ORF29570P | |
| 29575 | transposase | |||
| 31890 | MFS transporter | |||
| 31895 | M | M.Tsp7601aORF22630P (100% identity) | GCATGC | M.Tsp7712ORF31895P |
| 31900 | R | Tsp7601aORF22630P (100% identity) | GCATGC | Tsp7712ORF31895P |
| 31905 | LuxR family transcriptional regulator | |||
| plasmid unnamed13 | ||||
| 40175 | 116 aa hypothetical protein | |||
| 40180 | M | M.Ned1411ORF3410P (88% identity) | M.Tsp7712ORF40180P | |
| 40185 | 516 aa hypothetical protein | |||
| plasmid unnamed5 | ||||
| 38595 | DUF3387 domain-containing protein | |||
| 38600 | M | M.Tsp7601aORF40030P (100% identity) | GGCC | M.Tsp7712ORF38600P |
| 38605 | 254 aa hypothetical protein | |||
| plasmid unnamed8 | ||||
| 39250 | XisH family protein | |||
| 39255 | M | M.Tsp7601aORF40505P (100% identity) | M.Tsp7712ORF39255P | |
| 39260 | 212 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9615 | DUF433 domain-containing protein | |||
| 9620 | R | Tsp7601aMrrP (100% identity) | Tsp7712MrrP | |
| 9625 | alanine--tRNA ligase | |||
| 11160 | 143 aa hypothetical protein | |||
| 11165 | R | Tsp7601aMcrBP (100% identity) | Tsp7712McrBP | |
| 11170 | R | Tsp7601aMcrCP (100% identity) | Tsp7712McrCP | |
| 11175 | peptidoglycan-binding protein | |||