Escherichia coli SW4848 |
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Putative Escherichia coli SW4848 RM systems
Ref: Mota-Bravo,L.M. unpublished
REBASE ref # 34077
| Sequence length: | GenBank #: | |
| Chromosome: | 4,997,956 bp | CP107284 |
| plasmid p86: | 86,134 bp | CP107288 |
REBASE acronym: EcoSW4848
Org_num: 62911
All begin OF379_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14625 | transcription factor | |||
| 14630 | M | M.EcosB2CORFEP (100% identity) | GAGNNNNNGTTY | M.EcoSW4848ORF14630P |
| 14635 | S | S.Eco61761ORF14475P (100% identity) | GAGNNNNNGTTY | S.EcoSW4848ORF14630P |
| 14640 | DUF4433 domain-containing protein | |||
| 14645 | macro domain-containing protein | |||
| 14650 | R | Eco9052IP (99% identity) | GAGNNNNNGTTY | EcoSW4848ORF14630P |
| 14655 | M48 family metallopeptidase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1740 | cell division protein DamX | |||
| 1745 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoSW4848DamP |
| 1750 | ribulose-phosphate 3-epimerase | |||
| 2365 | DUF2556 family protein | |||
| 2370 | M | M.EcosS1ORF18905P (100% identity) | ATGCAT | M.EcoSW4848ORF2370P |
| 2375 | DNA-binding transcriptional regulator Fis | |||
| 9050 | phosphohydrolase | |||
| 9055 | M | M.SsoSE61DcmP (100% identity) | CCWGG | M.EcoSW4848DcmP |
| 9060 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcoSW4848DcmP |
| 9065 | drug/metabolite exporter YedA | |||
| 13025 | 92 aa hypothetical protein | |||
| 13030 | M | M.Ecoppa4ORF685P (100% identity) | M.EcoSW4848ORF13030P | |
| 13035 | R | Ecoppa4ORF685P (100% identity) | EcoSW4848ORF13030P | |
| 13040 | DUF977 family protein | |||
| plasmid p86 | ||||
| 25160 | 101 aa hypothetical protein | |||
| 25165 | M | M.SsoST152ORF25555P (100% identity) | M.EcoSW4848ORF25165P | |
| 25170 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13680 | isocitrate/isopropylmalate family dehydrogenase | |||
| 13685 | R | EcoS1C1GmrSDP (100% identity) | EcoSW4848GmrSD2P | |
| 13690 | recombinase family protein | |||
| 20540 | GTPase | |||
| 20545 | R | EcosS1MrrP (100% identity) | EcoSW4848MrrP | |
| 20550 | type I restriction-modification system | |||
| 20565 | endoribonuclease SymE | |||
| 20570 | R | EcoUTGmrSD2P (52% identity) | EcoSW4848GmrSDBP | |
| 20575 | R | EcoSP15GmrSDP (40% identity) | EcoSW4848GmrSDAP | |
| 20580 | Rpn family recombination-promoting | |||