Neisseria gonorrhoeae 1137292 |
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Putative Neisseria gonorrhoeae 1137292 RM systems
Ref: Riojas,M.A. et al. unpublished
REBASE ref # 35486
Complete sequence: 2,228,866 bp
GenBank #: CP107273
REBASE acronym: Ngo7292
Org_num: 62743
All begin OHM07_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3260 | ADP-glyceromanno-heptose 6-epimerase | |||
| 3265 | M | M.NgoWSII (100% identity) | M.Ngo7292ORF3265P | |
| 3270 | DNA damage-inducible protein D | |||
| 3275 | S | S.NgoJH9ORFNP (100% identity) | GCANNNNNNNNTGC | S1.Ngo7292ORF3265P |
| 3280 | S | S2.NgoN160ORF2075P (100% identity) | GCANNNNNNNNTGC | S2.Ngo7292ORF3265P |
| 3285 | R | NgoNCORF566P (100% identity) | Ngo7292ORF3265P | |
| 3290 | ATP-dependent Clp protease ATP-binding subunit | |||
| 4795 | replication-associated recombination protein A | |||
| 4800 | R | NgoWPIP (99% identity) | GAGNNNNNTAC | Ngo7292ORF4825P |
| 4805 | hydroxyacid dehydrogenase | |||
| 4810 | S | S.NgoWSI (100% identity) | GAGNNNNNTAC | S.Ngo7292ORF4825P |
| 4815 | 186 aa hypothetical protein | |||
| 4820 | 279 aa hypothetical protein | |||
| 4825 | M | M.NgoWSI (100% identity) | GAGNNNNNTAC | M.Ngo7292ORF4825P |
| 4830 | ABC transporter | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 675 | leucine--tRNA ligase | |||
| 680 | R | Ngos1291ORF5750P (100% identity) | GATC | Ngo7292ORF680P |
| 685 | site-specific DNA-methyltransferase | |||
| 680 | restriction endonuclease | |||
| 685 | M | M.NgoWPORF8P (93% identity) | GATC | M.Ngo7292ORF685P |
| 690 | 184 aa hypothetical protein | |||
| 1735 | 48 aa hypothetical protein | |||
| ??? | M | M.NgoSH240ORFLP (100% identity) | CCGG | M.Ngo7292ORF1740P |
| ??? | R | NgoTFGB2ORF1219P (100% identity) | CCGG | Ngo7292ORF1740P |
| 1760 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo7292ORF1740P | |
| 1765 | replication initiation factor domain-containing | |||
| 2100 | 62 aa hypothetical protein | |||
| 2105 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.Ngo7292ORF2105P |
| 2110 | R | Ngos1291ORF260P (100% identity) | CCGCGG | Ngo7292ORF2105P |
| 2115 | excinuclease ABC subunit UvrA | |||
| 2725 | phenylalanine--tRNA ligase subunit alpha | |||
| 2730 | V | V.NgoWSORF391P (100% identity) | V.Ngo7292ORF2735P | |
| ??? | M | M.NgoWSORF391P (100% identity) | CCGG | M.Ngo7292ORF2735P |
| 2745 | R | NgoWSORF391P (100% identity) | CCGG | Ngo7292ORF2735P |
| 2750 | phenylalanine--tRNA ligase subunit beta | |||
| 3030 | N-6 DNA methylase | |||
| 3035 | S | S.NgoWSORF450P (100% identity) | GACNNNNNTGA | S.Ngo7292ORF3035P |
| 3040 | 140 aa hypothetical protein | |||
| 3060 | uroporphyrinogen decarboxylase | |||
| 3065 | H | H.NgoN160ORF1885P (100% identity) | H.Ngo7292ORF3075P | |
| 3070 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo7292ORF3075P |
| 3075 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo7292ORF3075P |
| 3080 | DNA repair protein RadA | |||
| 4675 | 3-isopropylmalate dehydrogenase | |||
| 4680 | R | NgoWSORF784P (100% identity) | GGNNCC | Ngo7292ORF4685P |
| 4685 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo7292ORF4685P |
| 4690 | 3-isopropylmalate dehydratase small subunit | |||
| 5995 | anthranilate synthase component I | |||
| 6000 | M | M.Ngos1291ORF10080P (100% identity) | GCCGGC | M.Ngo7292ORF6000P |
| 6005 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | Ngo7292ORF6000P |
| 6010 | 5-(carboxyamino)imidazole ribonucleotide | |||
| 10500 | cysteine--tRNA ligase | |||
| 10505 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | Ngo7292ORF10510P |
| 10510 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.Ngo7292ORF10510P |
| 10515 | GTPase ObgE | |||
| 11035 | RNA-binding transcriptional accessory protein | |||
| 11040 | M | M1.NgoWSIII (100% identity) | GGTGA | M1.Ngo7292ORF11040P |
| 11045 | M | M1.Ngos1291II (100% identity) | GGTGA | M2.Ngo7292ORF11040P |
| 11050 | R | NgoWSIIIP (100% identity) | GGTGA | Ngo7292ORF11040P |
| 11055 | 93 aa hypothetical protein | |||
| 11625 | ribosome recycling factor | |||
| 11630 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.Ngo7292ORF11630P |
| ??? | R | NgoSW0236ORF9080P (100% identity) | GGCC | Ngo7292ORF11630P |
| 11645 | FUSC family protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4485 | alpha-hydroxy-acid oxidizing protein | |||
| 4490 | R | NgoNCORF1272P (100% identity) | Ngo7292ORF4495P | |
| ??? | M | M.NgoSH214ORFLP (100% identity) | M.Ngo7292ORF4495P | |
| 4505 | tRNA pseudouridine(55) synthase TruB | |||