Neisseria gonorrhoeae 1145734 |
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Putative Neisseria gonorrhoeae 1145734 RM systems
Ref: Riojas,M.A. et al. unpublished
REBASE ref # 35486
Complete sequence: 2,163,610 bp
GenBank #: CP107274
REBASE acronym: Ngo5734
Org_num: 62744
All begin OHM01_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2395 | ADP-glyceromanno-heptose 6-epimerase | |||
| 2400 | M | M.NgoWSII (100% identity) | GCANNNNNNNGTC | M.Ngo5734ORF2400P |
| 2405 | DNA damage-inducible protein D | |||
| 2410 | S | S.NgoWNII (100% identity) | GCANNNNNNNGTC | S.Ngo5734ORF2400P |
| 2415 | R | Ngo8254ORF410P (99% identity) | GCANNNNNNNGTC | Ngo5734ORF2400P |
| 2420 | ATP-dependent Clp protease ATP-binding subunit | |||
| 3920 | replication-associated recombination protein A | |||
| 3925 | R | NgoWPIP (98% identity) | GAGNNNNNTAC | Ngo5734ORF3955P |
| 3930 | hydroxyacid dehydrogenase | |||
| 3935 | S | S.NgoWSI (100% identity) | GAGNNNNNTAC | S.Ngo5734ORF3955P |
| 3940 | 186 aa hypothetical protein | |||
| 3945 | 279 aa hypothetical protein | |||
| 3950 | 78 aa hypothetical protein | |||
| 3955 | M | M.NgoWSI (87% identity) | GAGNNNNNTAC | M.Ngo5734ORF3955P |
| 3960 | ABC transporter | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 30 | leucine--tRNA ligase | |||
| 35 | R | Ngos1291ORF5750P (100% identity) | GATC | Ngo5734ORF35P |
| 40 | site-specific DNA-methyltransferase | |||
| 35 | restriction endonuclease | |||
| ??? | M | M.NgoWOORF8P (100% identity) | GATC | M.Ngo5734ORFAP |
| 45 | 184 aa hypothetical protein | |||
| 1220 | 62 aa hypothetical protein | |||
| 1225 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.Ngo5734ORF1225P |
| 1230 | R | Ngos1291ORF260P (100% identity) | CCGCGG | Ngo5734ORF1225P |
| 1235 | excinuclease ABC subunit UvrA | |||
| 1855 | phenylalanine--tRNA ligase subunit alpha | |||
| 1860 | V | V.NgoWSORF391P (100% identity) | V.Ngo5734ORF1865P | |
| ??? | M | M.NgoWSORF391P (100% identity) | CCGG | M.Ngo5734ORF1865P |
| 1875 | R | NgoWSORF391P (100% identity) | CCGG | Ngo5734ORF1865P |
| 1880 | phenylalanine--tRNA ligase subunit beta | |||
| 2160 | N-6 DNA methylase | |||
| 2165 | S | S.NgoWSORF450P (100% identity) | GACNNNNNTGA | S.Ngo5734ORF2165P |
| 2170 | 140 aa hypothetical protein | |||
| 2190 | uroporphyrinogen decarboxylase | |||
| 2195 | H | H.Ngos1291ORF7560P (100% identity) | H.Ngo5734ORF2205P | |
| 2200 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo5734ORF2205P |
| 2205 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo5734ORF2205P |
| 2210 | DNA repair protein RadA | |||
| 3800 | 3-isopropylmalate dehydrogenase | |||
| 3805 | R | NgoWPORF778P (100% identity) | GGNNCC | Ngo5734ORF3810P |
| 3810 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo5734ORF3810P |
| 3815 | 3-isopropylmalate dehydratase small subunit | |||
| 4825 | anthranilate synthase component I | |||
| 4830 | M | M.Ngos1291ORF10080P (100% identity) | GCCGGC | M.Ngo5734ORF4830P |
| 4835 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | Ngo5734ORF4830P |
| 4840 | 5-(carboxyamino)imidazole ribonucleotide | |||
| 8255 | replication initiation factor domain-containing | |||
| 8260 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo5734ORF8275P | |
| ??? | R | NgoWSORF1801P (100% identity) | CCGG | Ngo5734ORF8275P |
| ??? | M | M.NgoSH240ORFLP (100% identity) | CCGG | M.Ngo5734ORF8275P |
| 8285 | 48 aa hypothetical protein | |||
| 9495 | cysteine--tRNA ligase | |||
| 9500 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | Ngo5734ORF9505P |
| 9505 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.Ngo5734ORF9505P |
| 9510 | GTPase ObgE | |||
| 10030 | RNA-binding transcriptional accessory protein | |||
| 10035 | M | M1.NgoWSIII (100% identity) | GGTGA | M1.Ngo5734ORF10035P |
| 10040 | M | M1.Ngos1291II (100% identity) | GGTGA | M2.Ngo5734ORF10035P |
| 10045 | R | NgoWSIIIP (100% identity) | GGTGA | Ngo5734ORF10035P |
| 10050 | 93 aa hypothetical protein | |||
| 10580 | ribosome recycling factor | |||
| 10585 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.Ngo5734ORF10585P |
| ??? | R | NgoWSORF2276P (100% identity) | GGCC | Ngo5734ORF10585P |
| 10600 | FUSC family protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3610 | alpha-hydroxy-acid oxidizing protein | |||
| 3615 | R | Ngo9ORF1715P (100% identity) | Ngo5734ORF3620P | |
| ??? | M | M.Ngo991ORF4035P (99% identity) | M.Ngo5734ORF3620P | |
| 3630 | tRNA pseudouridine(55) synthase TruB | |||