Neisseria gonorrhoeae 1130991 |
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Putative Neisseria gonorrhoeae 1130991 RM systems
Ref: Riojas,M.A. et al. unpublished
REBASE ref # 35486
Complete sequence: 2,230,471 bp
GenBank #: CP107272
REBASE acronym: Ngo991
Org_num: 62742
All begin OHM05_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4335 | replication-associated recombination protein A | |||
| 4340 | R | NgoWPIP (99% identity) | GAGNNNNNTAC | Ngo991ORF4365P |
| 4345 | hydroxyacid dehydrogenase | |||
| 4350 | S | S.NgoWSI (100% identity) | GAGNNNNNTAC | S.Ngo991ORF4365P |
| 4355 | 186 aa hypothetical protein | |||
| 4360 | 279 aa hypothetical protein | |||
| 4365 | M | M.NgoWSI (100% identity) | GAGNNNNNTAC | M.Ngo991ORF4365P |
| 4370 | ABC transporter | |||
| 7125 | ATP-dependent Clp protease ATP-binding subunit | |||
| 7130 | R | NgoNCORF566P (100% identity) | Ngo991ORF7150P | |
| ??? | S | S2.NgoWSII (100% identity) | GCANNNNNNNNTGC | S2.Ngo991ORF7150P |
| 7140 | S | S1.NgoG2891ORF2185P (100% identity) | GCANNNNNNNNTGC | S1.Ngo991ORF7150P |
| 7145 | DNA damage-inducible protein D | |||
| 7150 | M | M.NgoSH240ORFMP (100% identity) | M.Ngo991ORF7150P | |
| 7155 | ADP-glyceromanno-heptose 6-epimerase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 30 | leucine--tRNA ligase | |||
| 35 | R | Ngos1291ORF5750P (100% identity) | GATC | Ngo991ORF35P |
| 40 | site-specific DNA-methyltransferase | |||
| 35 | restriction endonuclease | |||
| 40 | M | M.NgoWPORF8P (93% identity) | GATC | M.Ngo991ORF40P |
| 45 | 184 aa hypothetical protein | |||
| 4215 | 3-isopropylmalate dehydrogenase | |||
| 4220 | R | NgoWSORF784P (100% identity) | GGNNCC | Ngo991ORF4225P |
| 4225 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo991ORF4225P |
| 4230 | 3-isopropylmalate dehydratase small subunit | |||
| 5535 | anthranilate synthase component I | |||
| 5540 | M | M.Ngos1291ORF10080P (100% identity) | GCCGGC | M.Ngo991ORF5540P |
| 5545 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | Ngo991ORF5540P |
| 5550 | 5-(carboxyamino)imidazole ribonucleotide | |||
| 7335 | DNA repair protein RadA | |||
| 7340 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo991ORF7340P |
| 7345 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo991ORF7340P |
| 7350 | H | H.NgoN160ORF1885P (100% identity) | H.Ngo991ORF7340P | |
| 7355 | uroporphyrinogen decarboxylase | |||
| 7375 | 140 aa hypothetical protein | |||
| 7380 | S | S.NgoWSORF450P (100% identity) | GACNNNNNTGA | S.Ngo991ORF7385P |
| 7385 | M | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | M.Ngo991ORF7385P |
| 7390 | IS1595 family transposase | |||
| 7665 | phenylalanine--tRNA ligase subunit beta | |||
| 7670 | R | NgoWSORF391P (100% identity) | CCGG | Ngo991ORF7675P |
| ??? | M | M.NgoWSORF391P (100% identity) | CCGG | M.Ngo991ORF7675P |
| 7685 | V | V.NgoWSORF391P (100% identity) | V.Ngo991ORF7675P | |
| 7690 | phenylalanine--tRNA ligase subunit alpha | |||
| 8300 | excinuclease ABC subunit UvrA | |||
| 8305 | R | Ngos1291ORF260P (100% identity) | CCGCGG | Ngo991ORF8310P |
| 8310 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.Ngo991ORF8310P |
| 8315 | 62 aa hypothetical protein | |||
| 9800 | cysteine--tRNA ligase | |||
| 9805 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | Ngo991ORF9810P |
| 9810 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.Ngo991ORF9810P |
| 9815 | GTPase ObgE | |||
| 10335 | RNA-binding transcriptional accessory protein | |||
| 10340 | M | M1.NgoWSIII (100% identity) | GGTGA | M1.Ngo991ORF10340P |
| 10345 | M | M1.Ngos1291II (100% identity) | GGTGA | M2.Ngo991ORF10340P |
| 10350 | R | NgoWSIIIP (100% identity) | GGTGA | Ngo991ORF10340P |
| 10355 | 93 aa hypothetical protein | |||
| 10920 | ribosome recycling factor | |||
| 10925 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.Ngo991ORF10925P |
| ??? | R | NgoSW0236ORF9080P (100% identity) | GGCC | Ngo991ORF10925P |
| 10940 | FUSC family protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3560 | peptidylprolyl isomerase | |||
| 3565 | M | M.NgoWFI (100% identity) | CCACC | M.Ngo991ORF3565P |
| 3570 | R | NgoWPIIP (100% identity) | CCACC | Ngo991ORF3565P |
| 3575 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
| 4025 | alpha-hydroxy-acid oxidizing protein | |||
| 4030 | R | NgoNCORF1272P (100% identity) | Ngo991ORF4035P | |
| ??? | M | M.Ngo5734ORF3620P (99% identity) | M.Ngo991ORF4035P | |
| 4045 | tRNA pseudouridine(55) synthase TruB | |||