Neisseria gonorrhoeae 1123850 |
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Putative Neisseria gonorrhoeae 1123850 RM systems
Ref: Riojas,M.A. et al. unpublished
REBASE ref # 35486
Complete sequence: 2,217,711 bp
GenBank #: CP107271
REBASE acronym: Ngo3850
Org_num: 62741
All begin OHM03_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2065 | ADP-glyceromanno-heptose 6-epimerase | |||
| 2070 | M | M.NgoWSII (100% identity) | M.Ngo3850ORF2070P | |
| 2075 | DNA damage-inducible protein D | |||
| 2080 | S | S.Ngo19855ORF4500P (50% identity) | GCANNNNNNNNTGC | S1.Ngo3850ORF2070P |
| 2085 | S | S2.NgoN160ORF2075P (100% identity) | GCANNNNNNNNTGC | S2.Ngo3850ORF2070P |
| 2090 | R | Ngos1291ORF7750P (100% identity) | Ngo3850ORF2070P | |
| 2095 | ATP-dependent Clp protease ATP-binding subunit | |||
| 4800 | ABC transporter | |||
| 4805 | M | M.NgoPID1ORF461P (100% identity) | GAGNNNNNTAC | M.Ngo3850ORF4805P |
| 4810 | 219 aa hypothetical protein | |||
| 4815 | 186 aa hypothetical protein | |||
| 4820 | S | S.NgoWSI (100% identity) | GAGNNNNNTAC | S.Ngo3850ORF4805P |
| 4825 | hydroxyacid dehydrogenase | |||
| 4830 | R | NgoWPIP (99% identity) | GAGNNNNNTAC | Ngo3850ORF4805P |
| 4835 | replication-associated recombination protein A | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 30 | leucine--tRNA ligase | |||
| 35 | R | Ngos1291ORF5750P (100% identity) | GATC | Ngo3850ORF35P |
| 40 | site-specific DNA-methyltransferase | |||
| 35 | restriction endonuclease | |||
| ??? | M | M.NgoWOORF8P (100% identity) | GATC | M.Ngo3850ORFAP |
| 45 | 184 aa hypothetical protein | |||
| 1525 | phenylalanine--tRNA ligase subunit alpha | |||
| 1530 | V | V.NgoWSORF391P (100% identity) | V.Ngo3850ORF1535P | |
| ??? | M | M.NgoWSORF391P (100% identity) | CCGG | M.Ngo3850ORF1535P |
| 1545 | R | Npo18661ORFHP (100% identity) | CCGG | Ngo3850ORF1535P |
| 1550 | phenylalanine--tRNA ligase subunit beta | |||
| 1835 | N-6 DNA methylase | |||
| 1840 | S | S.NgoWSORF450P (100% identity) | GACNNNNNTGA | S.Ngo3850ORF1840P |
| 1845 | 140 aa hypothetical protein | |||
| 1865 | uroporphyrinogen decarboxylase | |||
| 1870 | H | H.NgoN160ORF1885P (100% identity) | H.Ngo3850ORF1880P | |
| 1875 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo3850ORF1880P |
| 1880 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo3850ORF1880P |
| 1885 | DNA repair protein RadA | |||
| 3655 | 5-(carboxyamino)imidazole ribonucleotide | |||
| 3660 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | Ngo3850ORF3665P |
| 3665 | M | M.Ngos1291ORF10080P (100% identity) | GCCGGC | M.Ngo3850ORF3665P |
| 3670 | anthranilate synthase component I | |||
| 4945 | 3-isopropylmalate dehydratase small subunit | |||
| 4950 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo3850ORF4950P |
| 4955 | R | NgoWLORF945P (100% identity) | GGNNCC | Ngo3850ORF4950P |
| 4960 | 3-isopropylmalate dehydrogenase | |||
| 6425 | excinuclease ABC subunit UvrA | |||
| 6430 | R | Ngos1291ORF260P (100% identity) | CCGCGG | Ngo3850ORF6435P |
| 6435 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.Ngo3850ORF6435P |
| 6440 | 62 aa hypothetical protein | |||
| 6920 | replication initiation factor domain-containing | |||
| 6925 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo3850ORF6940P | |
| ??? | R | NgoWSORF1801P (100% identity) | CCGG | Ngo3850ORF6940P |
| ??? | M | M.Ngos1291ORF65P (100% identity) | M.Ngo3850ORF6940P | |
| 6950 | 48 aa hypothetical protein | |||
| 10135 | 93 aa hypothetical protein | |||
| 10140 | R | NgoWSIIIP (100% identity) | GGTGA | Ngo3850ORF10145P |
| 10145 | M | M1.Ngos1291II (100% identity) | GGTGA | M1.Ngo3850ORF10145P |
| 10150 | M | M1.NgoWSIII (100% identity) | GGTGA | M2.Ngo3850ORF10145P |
| 10155 | RNA-binding transcriptional accessory protein | |||
| 10700 | GTPase ObgE | |||
| 10705 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.Ngo3850ORF10705P |
| 10710 | R | NgoNG250ORF10820P (100% identity) | RGCGCY | Ngo3850ORF10705P |
| 10715 | cysteine--tRNA ligase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5130 | tRNA pseudouridine(55) synthase TruB | |||
| 5135 | M | M.NgoSW0223ORF3260P (100% identity) | GCAGA | M.Ngo3850ORF5135P |
| 5140 | R | Ngo9ORF1715P (99% identity) | GCAGA | Ngo3850ORF5135P |
| 5145 | alpha-hydroxy-acid oxidizing protein | |||
| 5600 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
| 5605 | R | Ngos1291ORF8455P (99% identity) | Ngo3850ORF5610P | |
| 5610 | M | M.NgoHL122ORF2795P (100% identity) | M.Ngo3850ORF5610P | |
| 5615 | peptidylprolyl isomerase | |||