Neisseria gonorrhoeae 1081168 |
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Putative Neisseria gonorrhoeae 1081168 RM systems
Ref: Riojas,M.A. et al. unpublished
REBASE ref # 35486
Complete sequence: 2,230,282 bp
GenBank #: CP107270
REBASE acronym: Ngo1168
Org_num: 62740
All begin OHL99_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2625 | ADP-glyceromanno-heptose 6-epimerase | |||
| 2630 | M | M.NgoSH240ORFMP (100% identity) | GCANNNNNNNGTC | M.Ngo1168ORF2630P |
| 2635 | DNA damage-inducible protein D | |||
| ??? | S | S.Ngo13800ORF512P (100% identity) | GCANNNNNNNGTC | S.Ngo1168ORF2630P |
| 2650 | R | NgoNCORF566P (100% identity) | GCANNNNNNNGTC | Ngo1168ORF2630P |
| 2655 | ATP-dependent Clp protease ATP-binding subunit | |||
| 5420 | ABC transporter | |||
| 5425 | M | M.NgoWSI (100% identity) | GAGNNNNNTAC | M.Ngo1168ORF5425P |
| 5430 | 279 aa hypothetical protein | |||
| 5435 | 186 aa hypothetical protein | |||
| 5440 | S | S.NgoWSI (100% identity) | GAGNNNNNTAC | S.Ngo1168ORF5425P |
| 5445 | hydroxyacid dehydrogenase | |||
| 5450 | R | NgoWPIP (99% identity) | GAGNNNNNTAC | Ngo1168ORF5425P |
| 5455 | replication-associated recombination protein A | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 30 | leucine--tRNA ligase | |||
| 35 | R | Ngos1291ORF5750P (100% identity) | GATC | Ngo1168ORF35P |
| 40 | site-specific DNA-methyltransferase | |||
| 35 | restriction endonuclease | |||
| 40 | M | M.NgoWPORF8P (93% identity) | GATC | M.Ngo1168ORF40P |
| 45 | 184 aa hypothetical protein | |||
| 1095 | 48 aa hypothetical protein | |||
| ??? | M | M.NgoSH240ORFLP (100% identity) | CCGG | M.Ngo1168ORF1100P |
| ??? | R | NgoTFGB2ORF1219P (100% identity) | CCGG | Ngo1168ORF1100P |
| 1120 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo1168ORF1100P | |
| 1125 | replication initiation factor domain-containing | |||
| 1465 | 62 aa hypothetical protein | |||
| 1470 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.Ngo1168ORF1470P |
| 1475 | R | Ngos1291ORF260P (100% identity) | CCGCGG | Ngo1168ORF1470P |
| 1480 | excinuclease ABC subunit UvrA | |||
| 2080 | phenylalanine--tRNA ligase subunit alpha | |||
| 2085 | V | V.NgoWSORF391P (100% identity) | V.Ngo1168ORF2090P | |
| ??? | M | M.NgoWSORF391P (100% identity) | CCGG | M.Ngo1168ORF2090P |
| 2100 | R | NgoWSORF391P (100% identity) | CCGG | Ngo1168ORF2090P |
| 2105 | phenylalanine--tRNA ligase subunit beta | |||
| 2385 | IS1595 family transposase | |||
| 2390 | M | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | M.Ngo1168ORF2390P |
| 2395 | S | S.NgoWSORF450P (100% identity) | GACNNNNNTGA | S.Ngo1168ORF2390P |
| 2400 | 140 aa hypothetical protein | |||
| 2420 | uroporphyrinogen decarboxylase | |||
| 2425 | H | H.Ngos1291ORF7560P (100% identity) | H.Ngo1168ORF2435P | |
| 2430 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo1168ORF2435P |
| 2435 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo1168ORF2435P |
| 2440 | 171 aa hypothetical protein | |||
| 4240 | 5-(carboxyamino)imidazole ribonucleotide | |||
| 4245 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | Ngo1168ORF4250P |
| 4250 | M | M.Ngos1291ORF10080P (100% identity) | GCCGGC | M.Ngo1168ORF4250P |
| 4255 | anthranilate synthase component I | |||
| 5560 | 3-isopropylmalate dehydratase small subunit | |||
| 5565 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo1168ORF5565P |
| 5570 | R | NgoWSORF784P (100% identity) | GGNNCC | Ngo1168ORF5565P |
| 5575 | 3-isopropylmalate dehydrogenase | |||
| 9850 | cysteine--tRNA ligase | |||
| 9855 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | Ngo1168ORF9860P |
| 9860 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.Ngo1168ORF9860P |
| 9865 | GTPase ObgE | |||
| 10385 | RNA-binding transcriptional accessory protein | |||
| 10390 | M | M1.NgoWSIII (100% identity) | GGTGA | M1.Ngo1168ORF10390P |
| 10395 | M | M1.Ngos1291II (100% identity) | GGTGA | M2.Ngo1168ORF10390P |
| 10400 | R | NgoWSIIIP (100% identity) | GGTGA | Ngo1168ORF10390P |
| 10405 | 93 aa hypothetical protein | |||
| 10970 | ribosome recycling factor | |||
| 10975 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.Ngo1168ORF10975P |
| ??? | R | NgoSW0236ORF9080P (100% identity) | GGCC | Ngo1168ORF10975P |
| 10990 | FUSC family protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5745 | tRNA pseudouridine(55) synthase TruB | |||
| ??? | M | M.Ngo10239ORF5150P (99% identity) | M.Ngo1168ORF5750P | |
| 5760 | R | NgoNCORF1272P (100% identity) | Ngo1168ORF5750P | |
| 5765 | alpha-hydroxy-acid oxidizing protein | |||