Neisseria gonorrhoeae 10588 |
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Putative Neisseria gonorrhoeae 10588 RM systems
Ref: Shaskolskiy,B. and Kandinov,I. unpublished
REBASE ref # 35250
Complete sequence: 2,221,044 bp
GenBank #: CP098458
REBASE acronym: Ngo10588
Org_num: 62739
All begin NC846_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2050 | ADP-glyceromanno-heptose 6-epimerase | |||
| 2055 | M | M.NgoFA19ORF148P (100% identity) | M.Ngo10588ORF2055P | |
| 2060 | DNA damage-inducible protein D | |||
| 2065 | S | S1.Ngo9399ORF2075P (100% identity) | GCANNNNNNNNTGC | S1.Ngo10588ORF2055P |
| 2070 | S | S2.NgoN160ORF2075P (100% identity) | GCANNNNNNNNTGC | S2.Ngo10588ORF2055P |
| 2075 | R | Ngo9399ORF2075P (100% identity) | Ngo10588ORF2055P | |
| 2080 | ATP-dependent Clp protease ATP-binding subunit | |||
| 4780 | ABC transporter | |||
| 4785 | M | M.NgoPID1ORF461P (100% identity) | GAGNNNNNTAC | M.Ngo10588ORF4785P |
| 4790 | 280 aa hypothetical protein | |||
| 4795 | 186 aa hypothetical protein | |||
| 4800 | S | S.Ngo10814ORF3580P (100% identity) | GAGNNNNNTAC | S.Ngo10588ORF4785P |
| 4805 | hydroxyacid dehydrogenase | |||
| 4810 | R | NgoPID1ORF461P (99% identity) | GAGNNNNNTAC | Ngo10588ORF4785P |
| 4815 | replication-associated recombination protein A | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 30 | leucine--tRNA ligase | |||
| 35 | R | Ngos1291ORF5750P (100% identity) | GATC | Ngo10588ORF35P |
| 40 | site-specific DNA-methyltransferase | |||
| 35 | restriction endonuclease | |||
| ??? | M | M.NgoWOORF8P (100% identity) | GATC | M.Ngo10588ORFAP |
| 45 | 184 aa hypothetical protein | |||
| 1525 | phenylalanine--tRNA ligase subunit alpha | |||
| 1530 | V | V.NgoWSORF391P (100% identity) | V.Ngo10588ORF1535P | |
| ??? | M | M.NgoWSORF391P (100% identity) | CCGG | M.Ngo10588ORF1535P |
| 1545 | R | Ngo9399ORF1545P (100% identity) | CCGG | Ngo10588ORF1535P |
| 1550 | phenylalanine--tRNA ligase subunit beta | |||
| 1820 | N-6 DNA methylase | |||
| 1825 | S | S.NgoFA19ORF100P (100% identity) | GACNNNNNTGA | S.Ngo10588ORF1825P |
| 1830 | 140 aa hypothetical protein | |||
| 1850 | uroporphyrinogen decarboxylase | |||
| 1855 | H | H.Ngos1291ORF7560P (100% identity) | H.Ngo10588ORF1865P | |
| 1860 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo10588ORF1865P |
| 1865 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo10588ORF1865P |
| 1870 | DNA repair protein RadA | |||
| 3630 | 5-(carboxyamino)imidazole ribonucleotide | |||
| 3635 | R | NgoFQ01ORF4235P (100% identity) | GCCGGC | Ngo10588ORF3640P |
| 3640 | M | M.NgoWLORF1156P (100% identity) | GCCGGC | M.Ngo10588ORF3640P |
| 3645 | anthranilate synthase component I | |||
| 4905 | 3-isopropylmalate dehydratase small subunit | |||
| 4910 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo10588ORF4910P |
| 4915 | R | Ngos1291ORF9120P (100% identity) | GGNNCC | Ngo10588ORF4910P |
| 4920 | 3-isopropylmalate dehydrogenase | |||
| 6045 | replication initiation factor domain-containing | |||
| 6050 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo10588ORF6065P | |
| ??? | R | NgoWSORF1801P (100% identity) | CCGG | Ngo10588ORF6065P |
| ??? | M | M.NgoSH240ORFLP (100% identity) | CCGG | M.Ngo10588ORF6065P |
| 6075 | 48 aa hypothetical protein | |||
| 9505 | FUSC family protein | |||
| ??? | R | NgoWFORF2088P (100% identity) | GGCC | Ngo10588ORF9520P |
| 9520 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.Ngo10588ORF9520P |
| 9525 | ribosome recycling factor | |||
| 10050 | IS5/IS1182 family transposase | |||
| 10055 | R | NgoWSIIIP (100% identity) | GGTGA | Ngo10588ORF10060P |
| 10060 | M | M1.NgoFA19I (100% identity) | GGTGA | M1.Ngo10588ORF10060P |
| 10065 | M | M1.NgoWSIII (100% identity) | GGTGA | M2.Ngo10588ORF10060P |
| 10070 | RNA-binding transcriptional accessory protein | |||
| 10600 | GTPase ObgE | |||
| 10605 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.Ngo10588ORF10605P |
| 10610 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | Ngo10588ORF10605P |
| 10615 | cysteine--tRNA ligase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5550 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
| 5555 | R | Ngo10795ORF2805P (100% identity) | Ngo10588ORF5560P | |
| 5560 | M | M.NgoHL122ORF2795P (100% identity) | M.Ngo10588ORF5560P | |
| 5565 | peptidylprolyl isomerase | |||