Escherichia coli HUM3355 |
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Putative Escherichia coli HUM3355 RM systems
Ref: Rahube,T.O. et al. unpublished
REBASE ref # 35475
| Sequence length: | GenBank #: | |
| Chromosome: | 4,714,922 bp | CP093317 |
| plasmid pHUM3355_A: | 168,684 bp | CP093318 |
| plasmid pHUM3355_C: | 96,053 bp | CP093320 |
REBASE acronym: Eco3355
Org_num: 62715
All begin MLA23_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8330 | M | M.Sen64034II (100% identity) | AGCNNNNNCTTC | M.Eco3355ORF8330P |
| 8335 | S | S.Sen64034II (100% identity) | AGCNNNNNCTTC | S.Eco3355ORF8330P |
| 8340 | restriction system-associated AAA family ATPase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1685 | cell division protein DamX | |||
| 1690 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco3355DamP |
| 1695 | ribulose-phosphate 3-epimerase | |||
| 2315 | DUF2556 family protein | |||
| 2320 | M | M.Ssp28760ORF20045P (99% identity) | ATGCAT | M.Eco3355ORF2320P |
| 2325 | DNA-binding transcriptional regulator Fis | |||
| 14925 | phosphoadenosine phosphosulfate reductase family | |||
| 14930 | M | M.EcoL3452ORF6425P (100% identity) | M.Eco3355ORF14930P | |
| 14935 | TraR/DksA family transcriptional regulator | |||
| 19675 | IS3 family transposase | |||
| 19680 | M | M.EcosB7ADndBP (100% identity) | M.Eco3355DndBP | |
| 19685 | DNA phosphorothioation system sulfurtransferase | |||
| 19680 | DNA sulfur modification protein DndB | |||
| 19685 | M | M.EcosB7ADndCP (99% identity) | M.Eco3355DndCP | |
| 19690 | DNA sulfur modification protein DndD | |||
| 19685 | DNA phosphorothioation system sulfurtransferase | |||
| 19690 | M | M.EcosB7ADndDP (100% identity) | M.Eco3355DndDP | |
| 19695 | DNA sulfur modification protein DndE | |||
| 19690 | DNA sulfur modification protein DndD | |||
| 19695 | M | M.EcosB7ADndEP (100% identity) | M.Eco3355DndEP | |
| 19700 | AAA family ATPase | |||
| 19710 | DUF262 domain-containing protein | |||
| 19715 | R | EcosB7ADptHP (100% identity) | Eco3355DptHP | |
| 19720 | DNA phosphorothioation-dependent restriction | |||
| 19720 | DNA phosphorothioation-dependent restriction | |||
| 19725 | R | EcosB7ADptFP (100% identity) | Eco3355DptFP | |
| 19730 | integrase arm-type DNA-binding domain-containing | |||
| plasmid pHUM3355_A | ||||
| 23430 | 100 aa hypothetical protein | |||
| 23435 | M | M.YrupYR1ORFCP (100% identity) | CCNGG | M.Eco3355ORF23435P |
| 23440 | 143 aa hypothetical protein | |||
| plasmid pHUM3355_C | ||||
| 24670 | 103 aa hypothetical protein | |||
| 24675 | M | M.StyR64ORFAP (100% identity) | M.Eco3355ORF24675P | |
| 24680 | 73 aa hypothetical protein | |||