Neisseria gonorrhoeae NG0035 |
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Putative Neisseria gonorrhoeae NG0035 RM systems
Ref: Golparian,D. unpublished
REBASE ref # 34767
Complete sequence: 2,167,942 bp
GenBank #: CP107223
REBASE acronym: NgoH035
Org_num: 62745
All begin OE961_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2410 | ADP-glyceromanno-heptose 6-epimerase | |||
| 2415 | M | M.Ngos1291ORF7750P (100% identity) | GCANNNNNNNGTC | M.NgoH035ORF2415P |
| 2420 | DNA damage-inducible protein D | |||
| ??? | S | S.NgoJH16ORFHP (100% identity) | GCANNNNNNNGTC | S.NgoH035ORF2415P |
| 2435 | R | NgoWSIIP (100% identity) | GCANNNNNNNGTC | NgoH035ORF2415P |
| 2440 | ATP-dependent Clp protease ATP-binding subunit | |||
| 4890 | ABC transporter | |||
| 4895 | M | M.NgoWSI (100% identity) | GAGNNNNNTAC | M.NgoH035ORF4895P |
| 4900 | 279 aa hypothetical protein | |||
| 4905 | 186 aa hypothetical protein | |||
| 4910 | S | S.NgoWSI (100% identity) | GAGNNNNNTAC | S.NgoH035ORF4895P |
| 4915 | hydroxyacid dehydrogenase | |||
| 4920 | R | NgoWSIP (99% identity) | GAGNNNNNTAC | NgoH035ORF4895P |
| 4925 | replication-associated recombination protein A | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 30 | leucine--tRNA ligase | |||
| 35 | R | Ngos1291ORF5750P (100% identity) | GATC | NgoH035ORF35P |
| 40 | site-specific DNA-methyltransferase | |||
| 35 | restriction endonuclease | |||
| ??? | M | M.NgoWOORF8P (100% identity) | GATC | M.NgoH035ORFAP |
| 45 | 184 aa hypothetical protein | |||
| 1245 | 62 aa hypothetical protein | |||
| 1250 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.NgoH035ORF1250P |
| 1255 | R | Ngos1291ORF260P (100% identity) | CCGCGG | NgoH035ORF1250P |
| 1260 | excinuclease ABC subunit UvrA | |||
| 1880 | phenylalanine--tRNA ligase subunit alpha | |||
| 1885 | V | V.NgoWSORF391P (100% identity) | V.NgoH035ORF1890P | |
| ??? | M | M.NgoWSORF391P (100% identity) | CCGG | M.NgoH035ORF1890P |
| 1900 | R | NgoWSORF391P (100% identity) | CCGG | NgoH035ORF1890P |
| 1905 | phenylalanine--tRNA ligase subunit beta | |||
| 2175 | IS1595 family transposase | |||
| 2180 | RM | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | NgoH035ORF2180P |
| 2185 | S | S.NgoWSORF450P (100% identity) | GACNNNNNTGA | S.NgoH035ORF2180P |
| 2190 | 140 aa hypothetical protein | |||
| 2180 | N-6 DNA methylase | |||
| 2185 | S | S.NgoWSORF450P (100% identity) | GACNNNNNTGA | S.NgoH035ORF2185P |
| 2190 | 140 aa hypothetical protein | |||
| 2210 | uroporphyrinogen decarboxylase | |||
| 2215 | H | H.NgoN160ORF1885P (100% identity) | H.NgoH035ORF2225P | |
| 2220 | R | Ngos1291ORF7560P (100% identity) | GCSGC | NgoH035ORF2225P |
| 2225 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.NgoH035ORF2225P |
| 2230 | DNA repair protein RadA | |||
| 4010 | 5-(carboxyamino)imidazole ribonucleotide | |||
| 4015 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | NgoH035ORF4020P |
| 4020 | M | M.Ngos1291ORF10080P (100% identity) | GCCGGC | M.NgoH035ORF4020P |
| 4025 | anthranilate synthase component I | |||
| 5030 | 3-isopropylmalate dehydratase small subunit | |||
| 5035 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.NgoH035ORF5035P |
| 5040 | R | NgoWSORF784P (100% identity) | GGNNCC | NgoH035ORF5035P |
| 5045 | 3-isopropylmalate dehydrogenase | |||
| 8265 | replication initiation factor domain-containing | |||
| 8270 | V | V.Ngos1291ORF65P (100% identity) | V.NgoH035ORF8285P | |
| ??? | R | NgoWSORF1801P (100% identity) | CCGG | NgoH035ORF8285P |
| ??? | M | M.NgoSH240ORFLP (100% identity) | CCGG | M.NgoH035ORF8285P |
| 8295 | 48 aa hypothetical protein | |||
| 9490 | cysteine--tRNA ligase | |||
| 9495 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | NgoH035ORF9500P |
| 9500 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.NgoH035ORF9500P |
| 9505 | GTPase ObgE | |||
| 10025 | RNA-binding transcriptional accessory protein | |||
| 10030 | M | M1.NgoWSIII (100% identity) | GGTGA | M1.NgoH035ORF10030P |
| 10035 | M | M1.Ngos1291II (100% identity) | GGTGA | M2.NgoH035ORF10030P |
| 10040 | R | NgoWSIIIP (100% identity) | GGTGA | NgoH035ORF10030P |
| 10045 | 93 aa hypothetical protein | |||
| 10605 | ribosome recycling factor | |||
| 10610 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.NgoH035ORF10610P |
| ??? | R | NgoWSORF2276P (100% identity) | GGCC | NgoH035ORF10610P |
| 10625 | FUSC family protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5205 | tRNA pseudouridine(55) synthase TruB | |||
| 5210 | M | M.NgoWFORF680P (99% identity) | GCAGA | M.NgoH035ORF5210P |
| 5215 | R | NgoWSORF749P (100% identity) | GCAGA | NgoH035ORF5210P |
| 5220 | alpha-hydroxy-acid oxidizing protein | |||