Pseudomonas aeruginosa Pa3 |
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Putative Pseudomonas aeruginosa Pa3 RM systems
Ref: Van Nieuwenhuyse,B. et al. Nat Commun 13 (1), 5725 (2022)
REBASE ref # 35491
Complete sequence: 7,223,955 bp
GenBank #: CP086213
REBASE acronym: Pae3
Org_num: 62756
All begin LLJ53_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1565 | 94 aa hypothetical protein | |||
| 1570 | M | M.PaesAG1ORF291P (97% identity) | ATGNNNNNNCCTC | M.Pae3ORF1570P |
| 1575 | S | S.PaesAG1ORF291P (100% identity) | ATGNNNNNNCCTC | S.Pae3ORF1570P |
| 1580 | DNA binding domain-containing protein | |||
| 1585 | R | PaesAG1ORF291P (100% identity) | ATGNNNNNNCCTC | Pae3ORF1570P |
| 1590 | helix-turn-helix domain-containing protein | |||
| 13860 | tyrosine-type recombinase/integrase | |||
| 13865 | M | M.PaesAG1ORF2671P (100% identity) | CCCANNNNNNTCG | M.Pae3ORF13865P |
| 13870 | S | S.PaesAG1ORF2671P (100% identity) | CCCANNNNNNTCG | S.Pae3ORF13865P |
| 13875 | anti-phage defense ZorAB system protein ZorA | |||
| 13880 | OmpA family protein | |||
| 13885 | EH signature domain-containing protein | |||
| 13890 | DEAD/DEAH box helicase | |||
| 13895 | AAA family ATPase | |||
| 13900 | McrC family protein | |||
| 13905 | R | PaesAG1ORF2679P (100% identity) | CCCANNNNNNTCG | Pae3ORF13865P |
| 13910 | IS3 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11270 | 215 aa hypothetical protein | |||
| 11275 | M | M.Pae2857ORF11550P (100% identity) | M.Pae3ORF11275P | |
| 11280 | 145 aa hypothetical protein | |||
| 13815 | IS66 family transposase | |||
| 13820 | M | M.PaesAG1ORF2662P (100% identity) | M.Pae3ORF13820P | |
| 13825 | AAA family ATPase | |||
| 24070 | nucleoid-associated protein YejK | |||
| 24075 | M | M.PaesC79ORF28725P (100% identity) | M.Pae3ORF24075P | |
| 24080 | Arc family DNA-binding protein | |||
| 27840 | nucleoid-associated protein YejK | |||
| 27845 | M | M.PaesAG1ORF5438P (100% identity) | M.Pae3ORF27845P | |
| 27850 | Arc family DNA-binding protein | |||
| 29020 | 82 aa hypothetical protein | |||
| 29025 | R | PmeTTORFEP (100% identity) | CTCGAG | Pae3ORF29030P |
| 29030 | M | M.PmeTTORFEP (96% identity) | CTCGAG | M.Pae3ORF29030P |
| 29035 | recombinase family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 13890 | DEAD/DEAH box helicase | |||
| 13895 | R | PaeUKJ55McrBP (100% identity) | Pae3McrBP | |
| 13900 | R | Psp2021McrCP (100% identity) | Pae3McrCP | |
| 13905 | type I restriction endonuclease subunit R | |||