Neisseria gonorrhoeae 9464 |
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Putative Neisseria gonorrhoeae 9464 RM systems
Ref: Shaskolskiy,B. and Kandinov,I. unpublished
REBASE ref # 35250
Complete sequence: 2,228,428 bp
GenBank #: CP106826
REBASE acronym: Ngo9464
Org_num: 62487
All begin ND010_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2080 | ADP-glyceromanno-heptose 6-epimerase | |||
| 2085 | M | M.Ngos1291ORF7750P (100% identity) | GCANNNNNNGTC | M.Ngo9464ORF2085P |
| 2090 | DNA damage-inducible protein D | |||
| 2095 | S | S.NgoWMII (99% identity) | GCANNNNNNGTC | S.Ngo9464ORF2085P |
| 2100 | R | NgoN160ORF2075P (100% identity) | GCANNNNNNGTC | Ngo9464ORF2085P |
| 2105 | ATP-dependent Clp protease ATP-binding subunit | |||
| 4840 | ABC transporter | |||
| 4845 | M | M.Ngo9460ORF4830P (100% identity) | GAGNNNNNTAC | M.Ngo9464ORF4845P |
| 4850 | 217 aa hypothetical protein | |||
| 4855 | 186 aa hypothetical protein | |||
| 4860 | S | S.Ngo9460ORF4830P (100% identity) | GAGNNNNNTAC | S.Ngo9464ORF4845P |
| 4865 | hydroxyacid dehydrogenase | |||
| 4870 | R | Ngo9460ORF4830P (100% identity) | GAGNNNNNTAC | Ngo9464ORF4845P |
| 4875 | replication-associated recombination protein A | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 30 | leucine--tRNA ligase | |||
| 35 | M | M1.Ngo9460ORF35P (100% identity) | GATC | M1.Ngo9464ORF35P |
| 40 | M | M2.Ngo9460ORF35P (100% identity) | GATC | M2.Ngo9464ORF35P |
| 45 | 184 aa hypothetical protein | |||
| 1550 | phenylalanine--tRNA ligase subunit alpha | |||
| 1555 | V | V.NgoWSORF391P (100% identity) | V.Ngo9464ORF1560P | |
| ??? | M | M.NgoWSORF391P (100% identity) | CCGG | M.Ngo9464ORF1560P |
| 1570 | R | NgoWSORF391P (100% identity) | CCGG | Ngo9464ORF1560P |
| 1575 | phenylalanine--tRNA ligase subunit beta | |||
| 1845 | IS1595 family transposase | |||
| 1850 | M | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | M.Ngo9464ORF1850P |
| 1855 | S | S.Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | S.Ngo9464ORF1850P |
| 1860 | 140 aa hypothetical protein | |||
| 1880 | uroporphyrinogen decarboxylase | |||
| 1885 | H | H.NgoN160ORF1885P (100% identity) | H.Ngo9464ORF1895P | |
| 1890 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo9464ORF1895P |
| 1895 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo9464ORF1895P |
| 1900 | DNA repair protein RadA | |||
| 3655 | 5-(carboxyamino)imidazole ribonucleotide | |||
| 3660 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | Ngo9464ORF3665P |
| 3665 | M | M.NgoWLORF1156P (100% identity) | GCCGGC | M.Ngo9464ORF3665P |
| 3670 | anthranilate synthase component I | |||
| 4980 | 3-isopropylmalate dehydratase small subunit | |||
| 4985 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo9464ORF4985P |
| 4990 | R | NgoWSORF784P (100% identity) | GGNNCC | Ngo9464ORF4985P |
| 4995 | 3-isopropylmalate dehydrogenase | |||
| 6155 | replication initiation factor domain-containing | |||
| 6160 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo9464ORF6175P | |
| ??? | R | NgoWSORF1801P (100% identity) | CCGG | Ngo9464ORF6175P |
| ??? | M | M.NgoSH240ORFLP (100% identity) | CCGG | M.Ngo9464ORF6175P |
| 6185 | 48 aa hypothetical protein | |||
| 6375 | excinuclease ABC subunit UvrA | |||
| 6380 | R | Ngos1291ORF260P (100% identity) | CCGCGG | Ngo9464ORF6385P |
| 6385 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.Ngo9464ORF6385P |
| 6390 | 62 aa hypothetical protein | |||
| 9805 | cysteine--tRNA ligase | |||
| 9810 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | Ngo9464ORF9815P |
| 9815 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.Ngo9464ORF9815P |
| 9820 | GTPase ObgE | |||
| 10365 | RNA-binding transcriptional accessory protein | |||
| 10370 | M | M2.Ngos1291II (100% identity) | GGTGA | M1.Ngo9464ORF10370P |
| 10375 | M | M1.NgoFQ35ORF11380P (100% identity) | GGTGA | M2.Ngo9464ORF10370P |
| 10380 | R | NgoWSIIIP (100% identity) | GGTGA | Ngo9464ORF10370P |
| 10385 | 93 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5165 | tRNA pseudouridine(55) synthase TruB | |||
| ??? | M | M.NgoWOORF1023P (99% identity) | M.Ngo9464ORF5170P | |
| 5185 | R | Ngo9460ORF5150P (100% identity) | Ngo9464ORF5170P | |
| 5190 | alpha-hydroxy-acid oxidizing protein | |||
| 5645 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
| 5650 | R | Ngos1291ORF8455P (100% identity) | CCACC | Ngo9464ORF5655P |
| 5655 | M | M.Ngo10736ORF5655P (98% identity) | CCACC | M.Ngo9464ORF5655P |
| 5660 | peptidylprolyl isomerase | |||