Neisseria gonorrhoeae 9399 |
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Putative Neisseria gonorrhoeae 9399 RM systems
Ref: Shaskolskiy,B. and Kandinov,I. unpublished
REBASE ref # 35250
Complete sequence: 2,219,165 bp
GenBank #: CP106824
REBASE acronym: Ngo9399
Org_num: 62485
All begin NDL70_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2070 | ADP-glyceromanno-heptose 6-epimerase | |||
| 2075 | M | M.NgoFA19ORF148P (100% identity) | M.Ngo9399ORF2075P | |
| 2080 | DNA damage-inducible protein D | |||
| 2085 | S | S1.Ngo10792ORF2060P (100% identity) | GCANNNNNNNNTGC | S1.Ngo9399ORF2075P |
| 2090 | S | S2.NgoN160ORF2075P (100% identity) | GCANNNNNNNNTGC | S2.Ngo9399ORF2075P |
| 2095 | R | Ngo9343ORF2050P (100% identity) | Ngo9399ORF2075P | |
| 2100 | ATP-dependent Clp protease ATP-binding subunit | |||
| 4855 | ABC transporter | |||
| 4860 | M | M.NgoPID1ORF461P (100% identity) | GAGNNNNNTAC | M.Ngo9399ORF4860P |
| 4865 | 280 aa hypothetical protein | |||
| 4870 | 186 aa hypothetical protein | |||
| 4875 | S | S.Ngos1291I (100% identity) | GAGNNNNNTAC | S.Ngo9399ORF4860P |
| 4880 | hydroxyacid dehydrogenase | |||
| 4885 | R | NgoPID1ORF461P (99% identity) | GAGNNNNNTAC | Ngo9399ORF4860P |
| 4890 | replication-associated recombination protein A | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 30 | leucine--tRNA ligase | |||
| 35 | R | Ngos1291ORF5750P (100% identity) | GATC | Ngo9399ORF35P |
| 40 | site-specific DNA-methyltransferase | |||
| 35 | restriction endonuclease | |||
| ??? | M | M.NgoWOORF8P (100% identity) | GATC | M.Ngo9399ORFAP |
| 45 | 184 aa hypothetical protein | |||
| 1535 | phenylalanine--tRNA ligase subunit alpha | |||
| 1540 | V | V.NgoWSORF391P (100% identity) | V.Ngo9399ORF1545P | |
| ??? | M | M.NgoWSORF391P (100% identity) | CCGG | M.Ngo9399ORF1545P |
| 1555 | R | Ngo9343ORF1530P (100% identity) | CCGG | Ngo9399ORF1545P |
| 1560 | phenylalanine--tRNA ligase subunit beta | |||
| 1835 | IS1595 family transposase | |||
| 1840 | M | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | M.Ngo9399ORF1840P |
| 1845 | S | S.NgoFA19ORF100P (100% identity) | GACNNNNNTGA | S.Ngo9399ORF1840P |
| 1850 | 140 aa hypothetical protein | |||
| 1870 | uroporphyrinogen decarboxylase | |||
| 1875 | H | H.Ngos1291ORF7560P (100% identity) | H.Ngo9399ORF1885P | |
| 1880 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo9399ORF1885P |
| 1885 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo9399ORF1885P |
| 1890 | DNA repair protein RadA | |||
| 3670 | 5-(carboxyamino)imidazole ribonucleotide | |||
| 3675 | R | NgoFQ01ORF4235P (100% identity) | GCCGGC | Ngo9399ORF3680P |
| 3680 | M | M.NgoWLORF1156P (100% identity) | GCCGGC | M.Ngo9399ORF3680P |
| 3685 | anthranilate synthase component I | |||
| 4985 | 3-isopropylmalate dehydratase small subunit | |||
| 4990 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo9399ORF4990P |
| 4995 | R | Ngos1291ORF9120P (100% identity) | GGNNCC | Ngo9399ORF4990P |
| 5000 | 3-isopropylmalate dehydrogenase | |||
| 6135 | replication initiation factor domain-containing | |||
| 6140 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo9399ORF6155P | |
| ??? | R | NgoWSORF1801P (100% identity) | CCGG | Ngo9399ORF6155P |
| ??? | M | M.NgoSH240ORFLP (100% identity) | CCGG | M.Ngo9399ORF6155P |
| 6165 | 48 aa hypothetical protein | |||
| 9630 | FUSC family protein | |||
| ??? | R | NgoWFORF2088P (100% identity) | GGCC | Ngo9399ORF9645P |
| 9645 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.Ngo9399ORF9645P |
| 9650 | ribosome recycling factor | |||
| 10170 | IS5/IS1182 family transposase | |||
| 10175 | R | NgoWSIIIP (100% identity) | GGTGA | Ngo9399ORF10180P |
| 10180 | M | M1.NgoFA19I (100% identity) | GGTGA | M1.Ngo9399ORF10180P |
| 10185 | M | M1.NgoWSIII (100% identity) | GGTGA | M2.Ngo9399ORF10180P |
| 10190 | RNA-binding transcriptional accessory protein | |||
| 10730 | GTPase ObgE | |||
| 10735 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.Ngo9399ORF10735P |
| 10740 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | Ngo9399ORF10735P |
| 10745 | cysteine--tRNA ligase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5630 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
| 5635 | R | Ngos1291ORF8455P (100% identity) | Ngo9399ORF5640P | |
| 5640 | M | M.NgoHL122ORF2795P (100% identity) | M.Ngo9399ORF5640P | |
| 5645 | peptidylprolyl isomerase | |||