Neisseria gonorrhoeae 10727 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Neisseria gonorrhoeae 10727 RM systems
Ref: Shaskolskiy,B. and Kandinov,I. unpublished
REBASE ref # 35250
Complete sequence: 2,191,505 bp
GenBank #: CP106777
REBASE acronym: Ngo10727
Org_num: 62477
All begin LLE38_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2070 | ADP-glyceromanno-heptose 6-epimerase | |||
| 2075 | M | M.NgoFA19ORF148P (100% identity) | M.Ngo10727ORF2075P | |
| 2080 | DNA damage-inducible protein D | |||
| 2085 | S | S.NgoWMII (50% identity) | GCANNNNNNNNTGC | S1.Ngo10727ORF2075P |
| 2090 | S | S2.NgoN160ORF2075P (100% identity) | GCANNNNNNNNTGC | S2.Ngo10727ORF2075P |
| 2095 | R | Ngo9399ORF2075P (100% identity) | Ngo10727ORF2075P | |
| 2100 | ATP-dependent Clp protease ATP-binding subunit | |||
| 3580 | replication-associated recombination protein A | |||
| 3585 | R | NgoPID1ORF461P (99% identity) | GAGNNNNNTAC | Ngo10727ORF3610P |
| 3590 | hydroxyacid dehydrogenase | |||
| 3595 | S | S.Ngos1291I (100% identity) | GAGNNNNNTAC | S.Ngo10727ORF3610P |
| 3600 | 186 aa hypothetical protein | |||
| 3605 | 280 aa hypothetical protein | |||
| 3610 | M | M.NgoPID1ORF461P (100% identity) | GAGNNNNNTAC | M.Ngo10727ORF3610P |
| 3615 | ABC transporter | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 30 | leucine--tRNA ligase | |||
| 35 | R | Ngos1291ORF5750P (100% identity) | GATC | Ngo10727ORF35P |
| 40 | site-specific DNA-methyltransferase | |||
| 35 | restriction endonuclease | |||
| ??? | M | M.NgoWOORF8P (100% identity) | GATC | M.Ngo10727ORFAP |
| 45 | 184 aa hypothetical protein | |||
| 1540 | phenylalanine--tRNA ligase subunit alpha | |||
| 1545 | V | V.NgoWSORF391P (100% identity) | V.Ngo10727ORF1550P | |
| ??? | M | M.NgoWSORF391P (100% identity) | CCGG | M.Ngo10727ORF1550P |
| 1560 | R | Ngo9399ORF1545P (100% identity) | CCGG | Ngo10727ORF1550P |
| 1565 | phenylalanine--tRNA ligase subunit beta | |||
| 1835 | IS1595 family transposase | |||
| 1840 | M | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | M.Ngo10727ORF1840P |
| 1845 | S | S.NgoFA19ORF100P (100% identity) | GACNNNNNTGA | S.Ngo10727ORF1840P |
| 1850 | 140 aa hypothetical protein | |||
| 1870 | uroporphyrinogen decarboxylase | |||
| 1875 | H | H.Ngos1291ORF7560P (100% identity) | H.Ngo10727ORF1885P | |
| 1880 | R | Ngos1291ORF7560P (89% identity) | GCSGC | Ngo10727ORF1885P |
| 1885 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo10727ORF1885P |
| 1890 | DNA repair protein RadA | |||
| 3465 | 3-isopropylmalate dehydrogenase | |||
| 3470 | R | Ngos1291ORF9120P (99% identity) | GGNNCC | Ngo10727ORF3475P |
| 3475 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo10727ORF3475P |
| 3480 | 3-isopropylmalate dehydratase small subunit | |||
| 4755 | anthranilate synthase component I | |||
| 4760 | M | M.NgoWLORF1156P (100% identity) | GCCGGC | M.Ngo10727ORF4760P |
| 4765 | R | NgoFQ01ORF4235P (100% identity) | GCCGGC | Ngo10727ORF4760P |
| 4770 | 5-(carboxyamino)imidazole ribonucleotide | |||
| 6085 | replication initiation factor domain-containing | |||
| 6090 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo10727ORF6105P | |
| ??? | R | NgoWSORF1801P (100% identity) | CCGG | Ngo10727ORF6105P |
| ??? | M | M.NgoSH240ORFLP (100% identity) | CCGG | M.Ngo10727ORF6105P |
| 6115 | 48 aa hypothetical protein | |||
| 9440 | FUSC family protein | |||
| ??? | R | NgoWFORF2088P (100% identity) | GGCC | Ngo10727ORF9455P |
| 9455 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.Ngo10727ORF9455P |
| 9460 | ribosome recycling factor | |||
| 9980 | IS5/IS1182 family transposase | |||
| 9985 | R | NgoWSIIIP (100% identity) | GGTGA | Ngo10727ORF9990P |
| 9990 | M | M1.NgoFA19I (100% identity) | GGTGA | M1.Ngo10727ORF9990P |
| 9995 | M | M1.NgoWSIII (100% identity) | GGTGA | M2.Ngo10727ORF9990P |
| 10000 | RNA-binding transcriptional accessory protein | |||
| 10565 | GTPase ObgE | |||
| 10570 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.Ngo10727ORF10570P |
| 10575 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | Ngo10727ORF10570P |
| 10580 | cysteine--tRNA ligase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3280 | alpha-hydroxy-acid oxidizing protein | |||
| 3285 | R | NgoFA19ORF379P (100% identity) | Ngo10727ORF3290P | |
| 3290 | M | M.Ngo9126ORF3235BP (100% identity) | ACACC | M1.Ngo10727ORF3290P |
| 3295 | M | M1.Ngo23ORFHP (100% identity) | M2.Ngo10727ORF3290P | |
| 3300 | tRNA pseudouridine(55) synthase TruB | |||