Neisseria gonorrhoeae 10638 |
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Putative Neisseria gonorrhoeae 10638 RM systems
Ref: Shaskolskiy,B. and Kandinov,I. unpublished
REBASE ref # 35250
Complete sequence: 2,204,219 bp
GenBank #: CP106789
REBASE acronym: Ngo10638
Org_num: 62473
All begin LLE37_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6625 | replication-associated recombination protein A | |||
| 6630 | R | NgoPID1ORF461P (99% identity) | GAGNNNNNTAC | Ngo10638ORF6655P |
| 6635 | hydroxyacid dehydrogenase | |||
| 6640 | S | S.Ngo10814ORF3580P (100% identity) | GAGNNNNNTAC | S.Ngo10638ORF6655P |
| 6645 | 186 aa hypothetical protein | |||
| 6650 | 207 aa hypothetical protein | |||
| 6655 | M | M.NgoPID1ORF461P (100% identity) | GAGNNNNNTAC | M.Ngo10638ORF6655P |
| 6660 | ABC transporter | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 960 | FUSC family protein | |||
| ??? | R | NgoWFORF2088P (100% identity) | GGCC | Ngo10638ORF975P |
| 975 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.Ngo10638ORF975P |
| 980 | ribosome recycling factor | |||
| 1505 | IS5/IS1182 family transposase | |||
| 1510 | R | NgoWSIIIP (100% identity) | GGTGA | Ngo10638ORF1515P |
| 1515 | M | M1.NgoFA19I (100% identity) | GGTGA | M1.Ngo10638ORF1515P |
| 1520 | M | M1.NgoWSIII (100% identity) | GGTGA | M2.Ngo10638ORF1515P |
| 1525 | RNA-binding transcriptional accessory protein | |||
| 2055 | GTPase ObgE | |||
| 2060 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.Ngo10638ORF2060P |
| 2065 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | Ngo10638ORF2060P |
| 2070 | cysteine--tRNA ligase | |||
| 3105 | leucine--tRNA ligase | |||
| 3110 | R | Ngos1291ORF5750P (100% identity) | GATC | Ngo10638ORF3110P |
| 3115 | site-specific DNA-methyltransferase | |||
| 3110 | restriction endonuclease | |||
| ??? | M | M.NgoWOORF8P (100% identity) | GATC | M.Ngo10638ORFAP |
| 3120 | 184 aa hypothetical protein | |||
| 4615 | phenylalanine--tRNA ligase subunit alpha | |||
| 4620 | V | V.NgoWSORF391P (100% identity) | V.Ngo10638ORF4625P | |
| ??? | M | M.NgoWSORF391P (100% identity) | CCGG | M.Ngo10638ORF4625P |
| 4630 | R | Ngo9399ORF1545P (100% identity) | CCGG | Ngo10638ORF4625P |
| 4635 | phenylalanine--tRNA ligase subunit beta | |||
| 4905 | IS1595 family transposase | |||
| 4910 | M | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | M.Ngo10638ORF4910P |
| 4915 | S | S.NgoFA19ORF100P (100% identity) | GACNNNNNTGA | S.Ngo10638ORF4910P |
| 4920 | 140 aa hypothetical protein | |||
| 4940 | uroporphyrinogen decarboxylase | |||
| 4945 | H | H.Ngos1291ORF7560P (100% identity) | H.Ngo10638ORF4955P | |
| 4950 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo10638ORF4955P |
| 4955 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo10638ORF4955P |
| 4960 | DNA repair protein RadA | |||
| 6515 | 3-isopropylmalate dehydrogenase | |||
| 6520 | R | Ngos1291ORF9120P (100% identity) | GGNNCC | Ngo10638ORF6525P |
| 6525 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo10638ORF6525P |
| 6530 | 3-isopropylmalate dehydratase small subunit | |||
| 7815 | anthranilate synthase component I | |||
| 7820 | M | M.NgoWLORF1156P (100% identity) | GCCGGC | M.Ngo10638ORF7820P |
| 7825 | R | NgoFQ01ORF4235P (100% identity) | GCCGGC | Ngo10638ORF7820P |
| 7830 | 5-(carboxyamino)imidazole ribonucleotide | |||
| 9080 | replication initiation factor domain-containing | |||
| 9085 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo10638ORF9100P | |
| ??? | R | NgoWSORF1801P (100% identity) | CCGG | Ngo10638ORF9100P |
| ??? | M | M.NgoSH240ORFLP (100% identity) | CCGG | M.Ngo10638ORF9100P |
| 9110 | 48 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5865 | peptidylprolyl isomerase | |||
| 5870 | M | M.NgoSW0032ORF2780P (98% identity) | CCACC | M.Ngo10638ORF5870P |
| 5875 | R | Ngo10795ORF2805P (100% identity) | CCACC | Ngo10638ORF5870P |
| 5880 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
| 6330 | alpha-hydroxy-acid oxidizing protein | |||
| 6335 | R | NgoFA19ORF379P (100% identity) | Ngo10638ORF6340P | |
| 6340 | M | M.Ngo9126ORF3235BP (100% identity) | ACACC | M1.Ngo10638ORF6340P |
| 6345 | M | M.NgoG7944ORFGP (22% identity) | M2.Ngo10638ORF6340P | |
| 6350 | tRNA pseudouridine(55) synthase TruB | |||