Neisseria gonorrhoeae 10610 |
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Putative Neisseria gonorrhoeae 10610 RM systems
Ref: Shaskolskiy,B. and Kandinov,I. unpublished
REBASE ref # 35250
Complete sequence: 2,221,786 bp
GenBank #: CP106767
REBASE acronym: Ngo10610
Org_num: 62472
All begin LLE33_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2065 | ADP-glyceromanno-heptose 6-epimerase | |||
| 2070 | M | M.NgoFA19ORF148P (100% identity) | M.Ngo10610ORF2070P | |
| 2075 | DNA damage-inducible protein D | |||
| 2080 | S | S1.NgoWSII (100% identity) | GCANNNNNNNNTGC | S1.Ngo10610ORF2070P |
| 2085 | S | S2.NgoN160ORF2075P (100% identity) | GCANNNNNNNNTGC | S2.Ngo10610ORF2070P |
| 2090 | R | Ngo9399ORF2075P (100% identity) | Ngo10610ORF2070P | |
| 2095 | ATP-dependent Clp protease ATP-binding subunit | |||
| 4815 | ABC transporter | |||
| 4820 | M | M.NgoPID1ORF461P (100% identity) | GAGNNNNNTAC | M.Ngo10610ORF4820P |
| 4825 | 280 aa hypothetical protein | |||
| 4830 | 186 aa hypothetical protein | |||
| 4835 | S | S.Ngos1291I (100% identity) | GAGNNNNNTAC | S.Ngo10610ORF4820P |
| 4840 | hydroxyacid dehydrogenase | |||
| 4845 | R | NgoPID1ORF461P (99% identity) | GAGNNNNNTAC | Ngo10610ORF4820P |
| 4850 | replication-associated recombination protein A | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 30 | leucine--tRNA ligase | |||
| 35 | R | Ngos1291ORF5750P (100% identity) | GATC | Ngo10610ORF35P |
| 40 | site-specific DNA-methyltransferase | |||
| 35 | restriction endonuclease | |||
| ??? | M | M.NgoWOORF8P (100% identity) | GATC | M.Ngo10610ORFAP |
| 45 | 184 aa hypothetical protein | |||
| 1530 | phenylalanine--tRNA ligase subunit alpha | |||
| 1535 | V | V.NgoWSORF391P (100% identity) | V.Ngo10610ORF1540P | |
| ??? | M | M.NgoWSORF391P (100% identity) | CCGG | M.Ngo10610ORF1540P |
| 1550 | R | Ngo9399ORF1545P (100% identity) | CCGG | Ngo10610ORF1540P |
| 1555 | phenylalanine--tRNA ligase subunit beta | |||
| 1830 | IS1595 family transposase | |||
| 1835 | M | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | M.Ngo10610ORF1835P |
| 1840 | S | S.NgoFA19ORF100P (100% identity) | GACNNNNNTGA | S.Ngo10610ORF1835P |
| 1845 | 140 aa hypothetical protein | |||
| 1865 | uroporphyrinogen decarboxylase | |||
| 1870 | H | H.Ngos1291ORF7560P (100% identity) | H.Ngo10610ORF1880P | |
| 1875 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo10610ORF1880P |
| 1880 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo10610ORF1880P |
| 1885 | DNA repair protein RadA | |||
| 3630 | 5-(carboxyamino)imidazole ribonucleotide | |||
| 3635 | R | NgoFQ01ORF4235P (100% identity) | GCCGGC | Ngo10610ORF3640P |
| 3640 | M | M.NgoWLORF1156P (100% identity) | GCCGGC | M.Ngo10610ORF3640P |
| 3645 | anthranilate synthase component I | |||
| 4945 | 3-isopropylmalate dehydratase small subunit | |||
| 4950 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo10610ORF4950P |
| 4955 | R | Ngos1291ORF9120P (100% identity) | GGNNCC | Ngo10610ORF4950P |
| 4960 | 3-isopropylmalate dehydrogenase | |||
| 8095 | replication initiation factor domain-containing | |||
| 8100 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo10610ORF8115P | |
| ??? | R | NgoWSORF1801P (100% identity) | CCGG | Ngo10610ORF8115P |
| ??? | M | M.NgoSH240ORFLP (100% identity) | CCGG | M.Ngo10610ORF8115P |
| 8125 | 48 aa hypothetical protein | |||
| 9615 | FUSC family protein | |||
| ??? | R | NgoWFORF2088P (100% identity) | GGCC | Ngo10610ORF9630P |
| 9630 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.Ngo10610ORF9630P |
| 9635 | ribosome recycling factor | |||
| 10165 | 58 aa hypothetical protein | |||
| 10170 | R | NgoWSIIIP (100% identity) | GGTGA | Ngo10610ORF10175P |
| 10175 | M | M1.NgoFA19I (100% identity) | GGTGA | M1.Ngo10610ORF10175P |
| 10180 | M | M1.NgoWSIII (100% identity) | GGTGA | M2.Ngo10610ORF10175P |
| 10185 | RNA-binding transcriptional accessory protein | |||
| 10715 | GTPase ObgE | |||
| 10720 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.Ngo10610ORF10720P |
| 10725 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | Ngo10610ORF10720P |
| 10730 | cysteine--tRNA ligase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5120 | tRNA pseudouridine(55) synthase TruB | |||
| 5125 | M | M.NgoWSORF749P (21% identity) | M1.Ngo10610ORF5125P | |
| 5130 | M | M.Ngo9126ORF3235BP (100% identity) | ACACC | M2.Ngo10610ORF5125P |
| 5135 | R | NgoFA19ORF379P (100% identity) | Ngo10610ORF5125P | |
| 5140 | alpha-hydroxy-acid oxidizing protein | |||