Neisseria gonorrhoeae 10500 |
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Putative Neisseria gonorrhoeae 10500 RM systems
Ref: Shaskolskiy,B. and Kandinov,I. unpublished
REBASE ref # 35250
Complete sequence: 2,214,782 bp
GenBank #: CP106765
REBASE acronym: Ngo10500
Org_num: 62464
All begin LLE30_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2055 | ADP-glyceromanno-heptose 6-epimerase | |||
| 2060 | M | M.Ngo10702ORF2075P (100% identity) | M.Ngo10500ORF2060P | |
| 2065 | DNA damage-inducible protein D | |||
| 2070 | S | S1.Ngo9399ORF2075P (100% identity) | GCANNNNNNNNTGC | S1.Ngo10500ORF2060P |
| 2075 | S | S2.NgoN160ORF2075P (100% identity) | GCANNNNNNNNTGC | S2.Ngo10500ORF2060P |
| 2080 | R | Ngo9399ORF2075P (100% identity) | Ngo10500ORF2060P | |
| 2085 | ATP-dependent Clp protease ATP-binding subunit | |||
| 4795 | ABC transporter | |||
| 4800 | M | M.NgoPID1ORF461P (100% identity) | GAGNNNNNTAC | M.Ngo10500ORF4800P |
| 4805 | 280 aa hypothetical protein | |||
| 4810 | 186 aa hypothetical protein | |||
| 4815 | S | S.Ngos1291I (100% identity) | GAGNNNNNTAC | S.Ngo10500ORF4800P |
| 4820 | hydroxyacid dehydrogenase | |||
| 4825 | R | NgoPID1ORF461P (99% identity) | GAGNNNNNTAC | Ngo10500ORF4800P |
| 4830 | replication-associated recombination protein A | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 30 | leucine--tRNA ligase | |||
| 35 | R | Ngos1291ORF5750P (100% identity) | GATC | Ngo10500ORF35P |
| 40 | site-specific DNA-methyltransferase | |||
| 35 | restriction endonuclease | |||
| ??? | M | M.NgoWOORF8P (100% identity) | GATC | M.Ngo10500ORFAP |
| 45 | 184 aa hypothetical protein | |||
| 1530 | phenylalanine--tRNA ligase subunit alpha | |||
| 1535 | V | V.NgoWSORF391P (100% identity) | V.Ngo10500ORF1540P | |
| ??? | M | M.NgoWSORF391P (100% identity) | CCGG | M.Ngo10500ORF1540P |
| 1545 | R | Ngo9399ORF1545P (100% identity) | CCGG | Ngo10500ORF1540P |
| 1550 | phenylalanine--tRNA ligase subunit beta | |||
| 1820 | IS1595 family transposase | |||
| 1825 | M | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | M.Ngo10500ORF1825P |
| 1830 | S | S.NgoFA19ORF100P (100% identity) | GACNNNNNTGA | S.Ngo10500ORF1825P |
| 1835 | 140 aa hypothetical protein | |||
| 1855 | uroporphyrinogen decarboxylase | |||
| 1860 | H | H.Ngos1291ORF7560P (100% identity) | H.Ngo10500ORF1870P | |
| 1865 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo10500ORF1870P |
| 1870 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo10500ORF1870P |
| 1875 | DNA repair protein RadA | |||
| 3625 | 5-(carboxyamino)imidazole ribonucleotide | |||
| 3630 | R | NgoFQ01ORF4235P (100% identity) | GCCGGC | Ngo10500ORF3635P |
| 3635 | M | M.NgoWLORF1156P (100% identity) | GCCGGC | M.Ngo10500ORF3635P |
| 3640 | anthranilate synthase component I | |||
| 4925 | 3-isopropylmalate dehydratase small subunit | |||
| 4930 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo10500ORF4930P |
| 4935 | R | Ngos1291ORF9120P (100% identity) | GGNNCC | Ngo10500ORF4930P |
| 4940 | 3-isopropylmalate dehydrogenase | |||
| 6200 | replication initiation factor domain-containing | |||
| 6205 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo10500ORF6220P | |
| ??? | R | NgoWSORF1801P (100% identity) | CCGG | Ngo10500ORF6220P |
| ??? | M | M.NgoSH240ORFLP (100% identity) | CCGG | M.Ngo10500ORF6220P |
| 6230 | 48 aa hypothetical protein | |||
| 9520 | FUSC family protein | |||
| ??? | R | NgoWFORF2088P (100% identity) | GGCC | Ngo10500ORF9535P |
| 9535 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.Ngo10500ORF9535P |
| 9540 | ribosome recycling factor | |||
| 10065 | IS5/IS1182 family transposase | |||
| 10070 | R | NgoWSIIIP (100% identity) | GGTGA | Ngo10500ORF10075P |
| 10075 | M | M1.NgoFA19I (100% identity) | GGTGA | M1.Ngo10500ORF10075P |
| 10080 | M | M1.NgoWSIII (100% identity) | GGTGA | M2.Ngo10500ORF10075P |
| 10085 | RNA-binding transcriptional accessory protein | |||
| 10625 | GTPase ObgE | |||
| 10630 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.Ngo10500ORF10630P |
| 10635 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | Ngo10500ORF10630P |
| 10640 | cysteine--tRNA ligase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5105 | tRNA pseudouridine(55) synthase TruB | |||
| 5110 | M | M.Nme6178ORF5655P (94% identity) | ACACC | M.Ngo10500ORF5110P |
| 5115 | R | NgoFA19ORF379P (100% identity) | ACACC | Ngo10500ORF5110P |
| 5120 | alpha-hydroxy-acid oxidizing protein | |||