Neisseria gonorrhoeae 10524 |
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Putative Neisseria gonorrhoeae 10524 RM systems
Ref: Shaskolskiy,B. and Kandinov,I. unpublished
REBASE ref # 35250
Complete sequence: 2,207,788 bp
GenBank #: CP106769
REBASE acronym: Ngo10524
Org_num: 62465
All begin LLE34_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2075 | ADP-glyceromanno-heptose 6-epimerase | |||
| 2080 | M | M.NgoFA19ORF148P (100% identity) | M.Ngo10524ORF2080P | |
| 2085 | DNA damage-inducible protein D | |||
| 2090 | S | S.NgoWNII (50% identity) | GCANNNNNNNNTGC | S1.Ngo10524ORF2080P |
| 2095 | S | S2.NgoN160ORF2075P (100% identity) | GCANNNNNNNNTGC | S2.Ngo10524ORF2080P |
| 2100 | R | Ngo9399ORF2075P (100% identity) | Ngo10524ORF2080P | |
| 2105 | ATP-dependent Clp protease ATP-binding subunit | |||
| 3575 | replication-associated recombination protein A | |||
| 3580 | R | NgoPID1ORF461P (99% identity) | GAGNNNNNTAC | Ngo10524ORF3605P |
| 3585 | hydroxyacid dehydrogenase | |||
| 3590 | S | S.Ngos1291I (100% identity) | GAGNNNNNTAC | S.Ngo10524ORF3605P |
| 3595 | 186 aa hypothetical protein | |||
| 3600 | 280 aa hypothetical protein | |||
| 3605 | M | M.NgoPID1ORF461P (100% identity) | GAGNNNNNTAC | M.Ngo10524ORF3605P |
| 3610 | ABC transporter | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 30 | leucine--tRNA ligase | |||
| 35 | R | Ngos1291ORF5750P (100% identity) | GATC | Ngo10524ORF35P |
| 40 | site-specific DNA-methyltransferase | |||
| 35 | restriction endonuclease | |||
| ??? | M | M.NgoWOORF8P (100% identity) | GATC | M.Ngo10524ORFAP |
| 45 | 184 aa hypothetical protein | |||
| 1540 | phenylalanine--tRNA ligase subunit alpha | |||
| 1545 | V | V.NgoWSORF391P (100% identity) | V.Ngo10524ORF1550P | |
| ??? | M | M.NgoWSORF391P (100% identity) | CCGG | M.Ngo10524ORF1550P |
| 1560 | R | Ngo9399ORF1545P (100% identity) | CCGG | Ngo10524ORF1550P |
| 1565 | phenylalanine--tRNA ligase subunit beta | |||
| 1840 | IS1595 family transposase | |||
| 1845 | M | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | M.Ngo10524ORF1845P |
| 1850 | S | S.NgoFA19ORF100P (100% identity) | GACNNNNNTGA | S.Ngo10524ORF1845P |
| 1855 | 140 aa hypothetical protein | |||
| 1875 | uroporphyrinogen decarboxylase | |||
| 1880 | H | H.Ngos1291ORF7560P (100% identity) | H.Ngo10524ORF1890P | |
| 1885 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo10524ORF1890P |
| 1890 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo10524ORF1890P |
| 1895 | DNA repair protein RadA | |||
| 3465 | 3-isopropylmalate dehydrogenase | |||
| 3470 | R | Ngos1291ORF9120P (100% identity) | GGNNCC | Ngo10524ORF3475P |
| 3475 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo10524ORF3475P |
| 3480 | 3-isopropylmalate dehydratase small subunit | |||
| 4770 | anthranilate synthase component I | |||
| 4775 | M | M.NgoWLORF1156P (100% identity) | GCCGGC | M.Ngo10524ORF4775P |
| 4780 | R | NgoFQ01ORF4235P (100% identity) | GCCGGC | Ngo10524ORF4775P |
| 4785 | 5-(carboxyamino)imidazole ribonucleotide | |||
| 6210 | replication initiation factor domain-containing | |||
| 6215 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo10524ORF6230P | |
| ??? | R | NgoWSORF1801P (100% identity) | CCGG | Ngo10524ORF6230P |
| ??? | M | M.NgoSH240ORFLP (100% identity) | CCGG | M.Ngo10524ORF6230P |
| 6240 | 48 aa hypothetical protein | |||
| 9575 | FUSC family protein | |||
| ??? | R | NgoWFORF2088P (100% identity) | GGCC | Ngo10524ORF9590P |
| 9590 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.Ngo10524ORF9590P |
| 9595 | ribosome recycling factor | |||
| 10130 | 58 aa hypothetical protein | |||
| 10135 | R | NgoWSIIIP (100% identity) | GGTGA | Ngo10524ORF10140P |
| 10140 | M | M1.NgoFA19I (100% identity) | GGTGA | M1.Ngo10524ORF10140P |
| 10145 | M | M1.NgoWSIII (100% identity) | GGTGA | M2.Ngo10524ORF10140P |
| 10150 | RNA-binding transcriptional accessory protein | |||
| 10690 | GTPase ObgE | |||
| 10695 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.Ngo10524ORF10695P |
| 10700 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | Ngo10524ORF10695P |
| 10705 | cysteine--tRNA ligase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3285 | alpha-hydroxy-acid oxidizing protein | |||
| 3290 | R | NgoFA19ORF379P (100% identity) | ACACC | Ngo10524ORF3300P |
| 3295 | M | M.Ngo9126ORF3235BP (100% identity) | ACACC | M.Ngo10524ORF3300BP |
| 3300 | M | M.Ngo10771ORF3245AP (100% identity) | ACACC | M.Ngo10524ORF3300AP |
| 3305 | tRNA pseudouridine(55) synthase TruB | |||