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Putative Neisseria gonorrhoeae 10702 RM systems
Ref: Shaskolskiy,B. and Kandinov,I. unpublished
REBASE ref # 35250
Complete sequence: 2,212,515 bp
GenBank #: CP106775
REBASE acronym: Ngo10702
Org_num: 62474
All begin LLE32_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
2070 | ADP-glyceromanno-heptose 6-epimerase | |||
2075 | M | M.Ngo10500ORF2060P (100% identity) | M.Ngo10702ORF2075P | |
2080 | DNA damage-inducible protein D | |||
2085 | S | S1.Ngo9399ORF2075P (100% identity) | GCANNNNNNNNTGC | S1.Ngo10702ORF2075P |
2090 | S | S2.NgoN160ORF2075P (100% identity) | GCANNNNNNNNTGC | S2.Ngo10702ORF2075P |
2095 | R | Ngo9399ORF2075P (100% identity) | Ngo10702ORF2075P | |
2100 | ATP-dependent Clp protease ATP-binding subunit | |||
3570 | replication-associated recombination protein A | |||
3575 | R | NgoPID1ORF461P (99% identity) | GAGNNNNNTAC | Ngo10702ORF3600P |
3580 | hydroxyacid dehydrogenase | |||
3585 | S | S.Ngos1291I (100% identity) | GAGNNNNNTAC | S.Ngo10702ORF3600P |
3590 | 186 aa hypothetical protein | |||
3595 | 280 aa hypothetical protein | |||
3600 | M | M.NgoPID1ORF461P (100% identity) | GAGNNNNNTAC | M.Ngo10702ORF3600P |
3605 | ABC transporter | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
30 | leucine--tRNA ligase | |||
35 | R | Ngos1291ORF5750P (100% identity) | GATC | Ngo10702ORF35P |
40 | site-specific DNA-methyltransferase | |||
35 | restriction endonuclease | |||
??? | M | M.NgoWOORF8P (100% identity) | GATC | M.Ngo10702ORFAP |
45 | 184 aa hypothetical protein | |||
1540 | phenylalanine--tRNA ligase subunit alpha | |||
1545 | V | V.NgoWSORF391P (100% identity) | V.Ngo10702ORF1550P | |
??? | M | M.NgoWSORF391P (100% identity) | CCGG | M.Ngo10702ORF1550P |
1560 | R | Ngo9399ORF1545P (100% identity) | CCGG | Ngo10702ORF1550P |
1565 | phenylalanine--tRNA ligase subunit beta | |||
1835 | IS1595 family transposase | |||
1840 | M | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | M.Ngo10702ORF1840P |
1845 | S | S.NgoFA19ORF100P (100% identity) | GACNNNNNTGA | S.Ngo10702ORF1840P |
1850 | 140 aa hypothetical protein | |||
1870 | uroporphyrinogen decarboxylase | |||
1875 | H | H.Ngos1291ORF7560P (100% identity) | H.Ngo10702ORF1885P | |
1880 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo10702ORF1885P |
1885 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo10702ORF1885P |
1890 | DNA repair protein RadA | |||
3460 | 3-isopropylmalate dehydrogenase | |||
3465 | R | Ngos1291ORF9120P (100% identity) | GGNNCC | Ngo10702ORF3470P |
3470 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo10702ORF3470P |
3475 | 3-isopropylmalate dehydratase small subunit | |||
4760 | anthranilate synthase component I | |||
4765 | M | M.NgoWLORF1156P (100% identity) | GCCGGC | M.Ngo10702ORF4765P |
4770 | R | NgoFQ01ORF4235P (100% identity) | GCCGGC | Ngo10702ORF4765P |
4775 | 5-(carboxyamino)imidazole ribonucleotide | |||
6240 | replication initiation factor domain-containing | |||
6245 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo10702ORF6260P | |
??? | R | NgoWSORF1801P (100% identity) | CCGG | Ngo10702ORF6260P |
??? | M | M.NgoSH240ORFLP (100% identity) | CCGG | M.Ngo10702ORF6260P |
6270 | 48 aa hypothetical protein | |||
9555 | FUSC family protein | |||
??? | R | NgoWFORF2088P (100% identity) | GGCC | Ngo10702ORF9570P |
9570 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.Ngo10702ORF9570P |
9575 | ribosome recycling factor | |||
10100 | IS5/IS1182 family transposase | |||
10105 | R | NgoWSIIIP (100% identity) | GGTGA | Ngo10702ORF10110P |
10110 | M | M1.NgoFA19I (100% identity) | GGTGA | M1.Ngo10702ORF10110P |
10115 | M | M1.NgoWSIII (100% identity) | GGTGA | M2.Ngo10702ORF10110P |
10120 | RNA-binding transcriptional accessory protein | |||
10660 | GTPase ObgE | |||
10665 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.Ngo10702ORF10665P |
10670 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | Ngo10702ORF10665P |
10675 | cysteine--tRNA ligase | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
3270 | alpha-hydroxy-acid oxidizing protein | |||
3275 | R | NgoFA19ORF379P (100% identity) | Ngo10702ORF3280P | |
3280 | M | M.Ngo9126ORF3235BP (100% identity) | ACACC | M1.Ngo10702ORF3280P |
3285 | 60 aa hypothetical protein | |||
3290 | M | M.NgoWSORF749P (10% identity) | M2.Ngo10702ORF3280P | |
3295 | tRNA pseudouridine(55) synthase TruB |