Neisseria gonorrhoeae 10794 |
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Putative Neisseria gonorrhoeae 10794 RM systems
Ref: Shaskolskiy,B. and Kandinov,I. unpublished
REBASE ref # 35250
Complete sequence: 2,212,713 bp
GenBank #: CP106780
REBASE acronym: Ngo10794
Org_num: 62482
All begin LLE29_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2090 | ADP-glyceromanno-heptose 6-epimerase | |||
| 2095 | M | M.NgoFA19ORF148P (100% identity) | M.Ngo10794ORF2095P | |
| 2100 | DNA damage-inducible protein D | |||
| 2105 | S | S1.NgoWSII (100% identity) | GCANNNNNNNNTGC | S1.Ngo10794ORF2095P |
| 2110 | S | S2.NgoN160ORF2075P (100% identity) | GCANNNNNNNNTGC | S2.Ngo10794ORF2095P |
| 2115 | R | Ngo9399ORF2075P (100% identity) | Ngo10794ORF2095P | |
| 2120 | ATP-dependent Clp protease ATP-binding subunit | |||
| 3590 | replication-associated recombination protein A | |||
| 3595 | R | NgoPID1ORF461P (99% identity) | GAGNNNNNTAC | Ngo10794ORF3620P |
| 3600 | hydroxyacid dehydrogenase | |||
| 3605 | S | S.Ngo10814ORF3580P (100% identity) | GAGNNNNNTAC | S.Ngo10794ORF3620P |
| 3610 | 186 aa hypothetical protein | |||
| 3615 | 280 aa hypothetical protein | |||
| 3620 | M | M.NgoPID1ORF461P (100% identity) | GAGNNNNNTAC | M.Ngo10794ORF3620P |
| 3625 | ABC transporter | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 30 | leucine--tRNA ligase | |||
| 35 | R | Ngos1291ORF5750P (100% identity) | GATC | Ngo10794ORF35P |
| 40 | site-specific DNA-methyltransferase | |||
| 35 | restriction endonuclease | |||
| ??? | M | M.NgoWOORF8P (100% identity) | GATC | M.Ngo10794ORFAP |
| 45 | 184 aa hypothetical protein | |||
| 1560 | phenylalanine--tRNA ligase subunit alpha | |||
| 1565 | V | V.NgoWSORF391P (100% identity) | V.Ngo10794ORF1570P | |
| ??? | M | M.NgoWSORF391P (100% identity) | CCGG | M.Ngo10794ORF1570P |
| 1580 | R | Ngo9399ORF1545P (100% identity) | CCGG | Ngo10794ORF1570P |
| 1585 | phenylalanine--tRNA ligase subunit beta | |||
| 1855 | IS1595 family transposase | |||
| 1860 | M | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | M.Ngo10794ORF1860P |
| 1865 | S | S.NgoFA19ORF100P (100% identity) | GACNNNNNTGA | S.Ngo10794ORF1860P |
| 1870 | 140 aa hypothetical protein | |||
| 1890 | uroporphyrinogen decarboxylase | |||
| 1895 | H | H.Ngos1291ORF7560P (100% identity) | H.Ngo10794ORF1905P | |
| 1900 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo10794ORF1905P |
| 1905 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo10794ORF1905P |
| 1910 | DNA repair protein RadA | |||
| 3480 | 3-isopropylmalate dehydrogenase | |||
| 3485 | R | Ngos1291ORF9120P (100% identity) | GGNNCC | Ngo10794ORF3490P |
| 3490 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo10794ORF3490P |
| 3495 | 3-isopropylmalate dehydratase small subunit | |||
| 4780 | anthranilate synthase component I | |||
| 4785 | M | M.NgoWLORF1156P (100% identity) | GCCGGC | M.Ngo10794ORF4785P |
| 4790 | R | NgoFQ01ORF4235P (100% identity) | GCCGGC | Ngo10794ORF4785P |
| 4795 | 5-(carboxyamino)imidazole ribonucleotide | |||
| 6050 | replication initiation factor domain-containing | |||
| 6055 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo10794ORF6070P | |
| ??? | R | NgoWSORF1801P (100% identity) | CCGG | Ngo10794ORF6070P |
| ??? | M | M.NgoSH240ORFLP (100% identity) | CCGG | M.Ngo10794ORF6070P |
| 6080 | 48 aa hypothetical protein | |||
| 10105 | IS5/IS1182 family transposase | |||
| 10110 | R | NgoWSIIIP (100% identity) | GGTGA | Ngo10794ORF10115P |
| 10115 | M | M1.NgoFA19I (100% identity) | GGTGA | M1.Ngo10794ORF10115P |
| 10120 | M | M1.NgoWSIII (100% identity) | GGTGA | M2.Ngo10794ORF10115P |
| 10125 | RNA-binding transcriptional accessory protein | |||
| 10650 | GTPase ObgE | |||
| 10655 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.Ngo10794ORF10655P |
| 10660 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | Ngo10794ORF10655P |
| 10665 | cysteine--tRNA ligase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2835 | peptidylprolyl isomerase | |||
| 2840 | M | M.Ngo10638ORF5870P (96% identity) | CCACC | M.Ngo10794ORF2840P |
| 2845 | R | Ngos1291ORF8455P (100% identity) | CCACC | Ngo10794ORF2840P |
| 2850 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
| 3300 | alpha-hydroxy-acid oxidizing protein | |||
| 3305 | R | NgoFA19ORF379P (100% identity) | ACACC | Ngo10794ORF3310P |
| 3310 | M | M.Ngo3502I (98% identity) | ACACC | M.Ngo10794ORF3310P |
| 3315 | tRNA pseudouridine(55) synthase TruB | |||