Neisseria gonorrhoeae 10574 |
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Putative Neisseria gonorrhoeae 10574 RM systems
Ref: Shaskolskiy,B. and Kandinov,I. unpublished
REBASE ref # 35250
Complete sequence: 2,213,959 bp
GenBank #: CP106817
REBASE acronym: Ngo10574
Org_num: 62471
All begin LLE36_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2060 | ADP-glyceromanno-heptose 6-epimerase | |||
| 2065 | M | M.NgoFA19ORF148P (100% identity) | M.Ngo10574ORF2065P | |
| 2070 | DNA damage-inducible protein D | |||
| 2075 | S | S1.NgoWSII (100% identity) | GCANNNNNNNNTGC | S1.Ngo10574ORF2065P |
| 2080 | S | S2.NgoN160ORF2075P (100% identity) | GCANNNNNNNNTGC | S2.Ngo10574ORF2065P |
| 2085 | R | Ngo9399ORF2075P (100% identity) | Ngo10574ORF2065P | |
| 2090 | ATP-dependent Clp protease ATP-binding subunit | |||
| 4795 | ABC transporter | |||
| 4800 | M | M.NgoPID1ORF461P (100% identity) | GAGNNNNNTAC | M.Ngo10574ORF4800P |
| 4805 | 280 aa hypothetical protein | |||
| 4810 | 186 aa hypothetical protein | |||
| 4815 | S | S.Ngos1291I (100% identity) | GAGNNNNNTAC | S.Ngo10574ORF4800P |
| 4820 | hydroxyacid dehydrogenase | |||
| 4825 | R | NgoPID1ORF461P (99% identity) | GAGNNNNNTAC | Ngo10574ORF4800P |
| 4830 | replication-associated recombination protein A | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 30 | leucine--tRNA ligase | |||
| 35 | R | Ngos1291ORF5750P (100% identity) | GATC | Ngo10574ORF35P |
| 40 | site-specific DNA-methyltransferase | |||
| 35 | restriction endonuclease | |||
| ??? | M | M.NgoWSORF8P (100% identity) | GATC | M.Ngo10574ORF40P |
| 45 | 184 aa hypothetical protein | |||
| 1530 | phenylalanine--tRNA ligase subunit alpha | |||
| 1535 | V | V.NgoWSORF391P (100% identity) | V.Ngo10574ORF1540P | |
| ??? | M | M.NgoWSORF391P (100% identity) | CCGG | M.Ngo10574ORF1540P |
| 1550 | R | Ngo9399ORF1545P (100% identity) | CCGG | Ngo10574ORF1540P |
| 1555 | phenylalanine--tRNA ligase subunit beta | |||
| 1825 | IS1595 family transposase | |||
| 1830 | M | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | M.Ngo10574ORF1830P |
| 1835 | S | S.NgoFA19ORF100P (100% identity) | GACNNNNNTGA | S.Ngo10574ORF1830P |
| 1840 | 140 aa hypothetical protein | |||
| 1860 | uroporphyrinogen decarboxylase | |||
| 1865 | H | H.Ngos1291ORF7560P (100% identity) | H.Ngo10574ORF1875P | |
| 1870 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo10574ORF1875P |
| 1875 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo10574ORF1875P |
| 1880 | DNA repair protein RadA | |||
| 3630 | 5-(carboxyamino)imidazole ribonucleotide | |||
| 3635 | R | NgoFQ01ORF4235P (100% identity) | GCCGGC | Ngo10574ORF3640P |
| 3640 | M | M.NgoWLORF1156P (100% identity) | GCCGGC | M.Ngo10574ORF3640P |
| 3645 | anthranilate synthase component I | |||
| 4925 | 3-isopropylmalate dehydratase small subunit | |||
| 4930 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo10574ORF4930P |
| 4935 | R | Ngos1291ORF9120P (100% identity) | GGNNCC | Ngo10574ORF4930P |
| 4940 | 3-isopropylmalate dehydrogenase | |||
| 6085 | replication initiation factor domain-containing | |||
| 6090 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo10574ORF6105P | |
| ??? | R | NgoWSORF1801P (100% identity) | CCGG | Ngo10574ORF6105P |
| ??? | M | M.NgoSH240ORFLP (100% identity) | CCGG | M.Ngo10574ORF6105P |
| 6115 | 48 aa hypothetical protein | |||
| 9585 | FUSC family protein | |||
| ??? | R | NgoWFORF2088P (100% identity) | GGCC | Ngo10574ORF9600P |
| 9600 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.Ngo10574ORF9600P |
| 9605 | ribosome recycling factor | |||
| 10125 | IS5/IS1182 family transposase | |||
| 10130 | R | NgoWSIIIP (100% identity) | GGTGA | Ngo10574ORF10135P |
| 10135 | M | M1.NgoFA19I (100% identity) | GGTGA | M1.Ngo10574ORF10135P |
| 10140 | M | M1.NgoWSIII (100% identity) | GGTGA | M2.Ngo10574ORF10135P |
| 10145 | RNA-binding transcriptional accessory protein | |||
| 10680 | GTPase ObgE | |||
| 10685 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.Ngo10574ORF10685P |
| 10690 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | Ngo10574ORF10685P |
| 10695 | cysteine--tRNA ligase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5570 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
| 5575 | R | Ngos1291ORF8455P (100% identity) | CCACC | Ngo10574ORF5580P |
| 5580 | M | M.NgoSW0223ORF2790P (94% identity) | CCACC | M.Ngo10574ORF5580P |
| 5585 | peptidylprolyl isomerase | |||