Neisseria gonorrhoeae 9431 |
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Putative Neisseria gonorrhoeae 9431 RM systems
Ref: Shaskolskiy,B. and Kandinov,I. unpublished
REBASE ref # 35250
Complete sequence: 2,227,248 bp
GenBank #: CP106813
REBASE acronym: Ngo9431
Org_num: 62486
All begin OCL45_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2085 | ADP-glyceromanno-heptose 6-epimerase | |||
| 2090 | M | M.Ngos1291ORF7750P (100% identity) | M.Ngo9431ORF2090P | |
| 2095 | DNA damage-inducible protein D | |||
| 2100 | S | S1.NgoCT602ORF2070P (99% identity) | GCANNNNNNNNTGC | S1.Ngo9431ORF2090P |
| 2105 | S | S2.Ngo10736ORF2090P (100% identity) | GCANNNNNNNNTGC | S2.Ngo9431ORF2090P |
| 2110 | R | NgoN160ORF2075P (100% identity) | Ngo9431ORF2090P | |
| 2115 | ATP-dependent Clp protease ATP-binding subunit | |||
| 4870 | ABC transporter | |||
| 4875 | M | M.Ngo9464ORF4845P (100% identity) | GAGNNNNNTAC | M.Ngo9431ORF4875P |
| 4880 | 271 aa hypothetical protein | |||
| 4885 | 190 aa hypothetical protein | |||
| 4890 | S | S.Ngo9464ORF4845P (100% identity) | GAGNNNNNTAC | S.Ngo9431ORF4875P |
| 4895 | hydroxyacid dehydrogenase | |||
| 4900 | R | Ngo9464ORF4845P (100% identity) | GAGNNNNNTAC | Ngo9431ORF4875P |
| 4905 | replication-associated recombination protein A | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 30 | leucine--tRNA ligase | |||
| 35 | M | M1.Ngo9464ORF35P (100% identity) | GATC | M1.Ngo9431ORF35P |
| 40 | M | M2.Ngo9464ORF35P (100% identity) | GATC | M2.Ngo9431ORF35P |
| 45 | 184 aa hypothetical protein | |||
| 1555 | phenylalanine--tRNA ligase subunit alpha | |||
| 1560 | V | V.NgoWSORF391P (100% identity) | V.Ngo9431ORF1565P | |
| ??? | M | M.NgoWSORF391P (100% identity) | CCGG | M.Ngo9431ORF1565P |
| 1575 | R | NgoWSORF391P (100% identity) | CCGG | Ngo9431ORF1565P |
| 1580 | phenylalanine--tRNA ligase subunit beta | |||
| 1850 | IS1595 family transposase | |||
| 1855 | M | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | M.Ngo9431ORF1855P |
| 1860 | S | S.Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | S.Ngo9431ORF1855P |
| 1865 | 140 aa hypothetical protein | |||
| 1885 | uroporphyrinogen decarboxylase | |||
| 1890 | H | H.NgoN160ORF1885P (100% identity) | H.Ngo9431ORF1900P | |
| 1895 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo9431ORF1900P |
| 1900 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo9431ORF1900P |
| 1905 | DNA repair protein RadA | |||
| 3670 | 5-(carboxyamino)imidazole ribonucleotide | |||
| 3675 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | Ngo9431ORF3680P |
| 3680 | M | M.NgoWLORF1156P (100% identity) | GCCGGC | M.Ngo9431ORF3680P |
| 3685 | anthranilate synthase component I | |||
| 5010 | 3-isopropylmalate dehydratase small subunit | |||
| 5015 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo9431ORF5015P |
| 5020 | R | NgoWSORF784P (100% identity) | GGNNCC | Ngo9431ORF5015P |
| 5025 | 3-isopropylmalate dehydrogenase | |||
| 6175 | replication initiation factor domain-containing | |||
| 6180 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo9431ORF6195P | |
| ??? | R | NgoWSORF1801P (100% identity) | CCGG | Ngo9431ORF6195P |
| ??? | M | M.NgoSH240ORFLP (100% identity) | CCGG | M.Ngo9431ORF6195P |
| 6205 | 48 aa hypothetical protein | |||
| 6395 | excinuclease ABC subunit UvrA | |||
| 6400 | R | Ngos1291ORF260P (100% identity) | CCGCGG | Ngo9431ORF6405P |
| 6405 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.Ngo9431ORF6405P |
| 6410 | 62 aa hypothetical protein | |||
| 9825 | cysteine--tRNA ligase | |||
| 9830 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | Ngo9431ORF9835P |
| 9835 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.Ngo9431ORF9835P |
| 9840 | GTPase ObgE | |||
| 10395 | RNA-binding transcriptional accessory protein | |||
| 10400 | M | M2.Ngos1291II (100% identity) | GGTGA | M1.Ngo9431ORF10400P |
| 10405 | M | M1.NgoFQ35ORF11380P (100% identity) | GGTGA | M2.Ngo9431ORF10400P |
| 10410 | R | NgoWSIIIP (100% identity) | GGTGA | Ngo9431ORF10400P |
| 10415 | 93 aa hypothetical protein | |||
| 10970 | ribosome recycling factor | |||
| 10975 | M | M.Ngo9460ORF10880P (100% identity) | GGCC | M.Ngo9431ORF10975P |
| 10980 | R | Ngos1291ORF3515P (100% identity) | GGCC | Ngo9431ORF10975P |
| 10985 | FUSC family protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5195 | tRNA pseudouridine(55) synthase TruB | |||
| ??? | M | M.Ngo0ORF3290P (99% identity) | M.Ngo9431ORF5200P | |
| 5215 | R | Ngo9464ORF5170P (100% identity) | Ngo9431ORF5200P | |
| 5220 | alpha-hydroxy-acid oxidizing protein | |||