Neisseria gonorrhoeae 10531 |
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Putative Neisseria gonorrhoeae 10531 RM systems
Ref: Shaskolskiy,B. and Kandinov,I. unpublished
REBASE ref # 35250
| Sequence length: | GenBank #: | |
| Chromosome: | 2,214,951 bp | CP106811 |
| Chromosome: | 2,214,953 bp | CP106771 |
REBASE acronym:
Org_num:
All begin OCL46_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2070 | ADP-glyceromanno-heptose 6-epimerase | |||
| 2075 | M | M.NgoFA19ORF148P (100% identity) | M.Ngo10531ORF2075P | |
| 2080 | DNA damage-inducible protein D | |||
| 2085 | S | S.NgoWMII (50% identity) | GCANNNNNNNNTGC | S1.Ngo10531ORF2075P |
| 2090 | S | S2.NgoN160ORF2075P (100% identity) | GCANNNNNNNNTGC | S2.Ngo10531ORF2075P |
| 2095 | R | Ngo9399ORF2075P (100% identity) | Ngo10531ORF2075P | |
| 2100 | ATP-dependent Clp protease ATP-binding subunit | |||
| 4800 | ABC transporter | |||
| 4805 | M | M.NgoPID1ORF461P (100% identity) | GAGNNNNNTAC | M.Ngo10531ORF4805P |
| 4810 | 280 aa hypothetical protein | |||
| 4815 | 186 aa hypothetical protein | |||
| 4820 | S | S.Ngos1291I (100% identity) | GAGNNNNNTAC | S.Ngo10531ORF4805P |
| 4825 | hydroxyacid dehydrogenase | |||
| 4830 | R | NgoPID1ORF461P (99% identity) | GAGNNNNNTAC | Ngo10531ORF4805P |
| 4835 | replication-associated recombination protein A | |||
| Chromosome | ||||
| ??? | M | M.NgoPID1ORF461P (100% identity) | GAGNNNNNTAC | M.Ngo10531aORFBP |
| ??? | S | S.Ngos1291I (100% identity) | GAGNNNNNTAC | S.Ngo10531aORFBP |
| ??? | R | NgoPID1ORF461P (99% identity) | GAGNNNNNTAC | Ngo10531aORFBP |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 30 | leucine--tRNA ligase | |||
| 35 | R | Ngos1291ORF5750P (100% identity) | GATC | Ngo10531ORF35P |
| 40 | site-specific DNA-methyltransferase | |||
| 35 | restriction endonuclease | |||
| ??? | M | M.NgoWOORF8P (100% identity) | GATC | M.Ngo10531ORFAP |
| 45 | 184 aa hypothetical protein | |||
| 1540 | phenylalanine--tRNA ligase subunit alpha | |||
| 1545 | V | V.NgoWSORF391P (100% identity) | V.Ngo10531ORF1550P | |
| ??? | M | M.NgoWSORF391P (100% identity) | CCGG | M.Ngo10531ORF1550P |
| 1560 | R | Ngo9399ORF1545P (100% identity) | CCGG | Ngo10531ORF1550P |
| 1565 | phenylalanine--tRNA ligase subunit beta | |||
| 1835 | IS1595 family transposase | |||
| 1840 | M | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | M.Ngo10531ORF1840P |
| 1845 | S | S.NgoFA19ORF100P (100% identity) | GACNNNNNTGA | S.Ngo10531ORF1840P |
| 1850 | 140 aa hypothetical protein | |||
| 1870 | uroporphyrinogen decarboxylase | |||
| 1875 | H | H.Ngos1291ORF7560P (100% identity) | H.Ngo10531ORF1885P | |
| 1880 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo10531ORF1885P |
| 1885 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo10531ORF1885P |
| 1890 | DNA repair protein RadA | |||
| 3630 | 5-(carboxyamino)imidazole ribonucleotide | |||
| 3635 | R | NgoFQ01ORF4235P (100% identity) | GCCGGC | Ngo10531ORF3640P |
| 3640 | M | M.NgoWLORF1156P (100% identity) | GCCGGC | M.Ngo10531ORF3640P |
| 3645 | anthranilate synthase component I | |||
| 4930 | 3-isopropylmalate dehydratase small subunit | |||
| 4935 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo10531ORF4935P |
| 4940 | R | Ngos1291ORF9120P (100% identity) | GGNNCC | Ngo10531ORF4935P |
| 4945 | 3-isopropylmalate dehydrogenase | |||
| 6210 | replication initiation factor domain-containing | |||
| 6215 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo10531ORF6230P | |
| ??? | R | NgoWSORF1801P (100% identity) | CCGG | Ngo10531ORF6230P |
| ??? | M | M.NgoSH240ORFLP (100% identity) | CCGG | M.Ngo10531ORF6230P |
| 6240 | 48 aa hypothetical protein | |||
| 9560 | FUSC family protein | |||
| ??? | R | NgoWFORF2088P (100% identity) | GGCC | Ngo10531ORF9575P |
| 9575 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.Ngo10531ORF9575P |
| 9580 | ribosome recycling factor | |||
| 10110 | 58 aa hypothetical protein | |||
| 10115 | R | NgoWSIIIP (100% identity) | GGTGA | Ngo10531ORF10120P |
| 10120 | M | M1.NgoFA19I (100% identity) | GGTGA | M1.Ngo10531ORF10120P |
| 10125 | M | M1.NgoWSIII (100% identity) | GGTGA | M2.Ngo10531ORF10120P |
| 10130 | RNA-binding transcriptional accessory protein | |||
| 10670 | GTPase ObgE | |||
| 10675 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.Ngo10531ORF10675P |
| 10680 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | Ngo10531ORF10675P |
| 10685 | cysteine--tRNA ligase | |||
| Chromosome | ||||
| ??? | R | NgoSH240ORFPP (100% identity) | Ngo10531aORFOP | |
| ??? | M | M.NgoWOORF8P (100% identity) | GATC | M.Ngo10531aORFNP |
| ??? | V | V.NgoWSORF391P (100% identity) | V.Ngo10531aORFJP | |
| ??? | M | M.NgoWSORF391P (100% identity) | CCGG | M.Ngo10531aORFJP |
| ??? | R | Ngo9399ORF1545P (100% identity) | CCGG | Ngo10531aORFJP |
| ??? | M | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | M.Ngo10531aORFMP |
| ??? | S | S.NgoFA19ORF100P (100% identity) | GACNNNNNTGA | S.Ngo10531aORFMP |
| ??? | H | H.Ngos1291ORF7560P (100% identity) | H.Ngo10531aORFKP | |
| ??? | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo10531aORFKP |
| ??? | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo10531aORFKP |
| ??? | R | NgoFQ01ORF4235P (100% identity) | GCCGGC | Ngo10531aORFEP |
| ??? | M | M.NgoWLORF1156P (100% identity) | GCCGGC | M.Ngo10531aORFEP |
| ??? | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo10531aORFGP |
| ??? | R | Ngos1291ORF9120P (100% identity) | GGNNCC | Ngo10531aORFGP |
| ??? | V | V.Ngos1291ORF65P (100% identity) | V.Ngo10531aORFLP | |
| ??? | R | NgoWSORF1801P (100% identity) | CCGG | Ngo10531aORFLP |
| ??? | M | M.NgoSH240ORFLP (100% identity) | CCGG | M.Ngo10531aORFLP |
| ??? | R | NgoWFORF2088P (100% identity) | GGCC | Ngo10531aORFCP |
| ??? | M | M.NgoSH240ORFKP (100% identity) | GGCC | M.Ngo10531aORFCP |
| ??? | R | NgoWFIIP (100% identity) | GGTGA | Ngo10531aORFHP |
| ??? | M | M1.NgoFA19I (100% identity) | GGTGA | M1.Ngo10531aORFHP |
| ??? | M | M1.NgoWSIII (100% identity) | GGTGA | M2.Ngo10531aORFHP |
| ??? | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.Ngo10531aORFFP |
| ??? | R | NgoJH9ORFDP (100% identity) | RGCGCY | Ngo10531aORFFP |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5580 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
| 5585 | R | Ngos1291ORF8455P (100% identity) | CCACC | Ngo10531ORF5590P |
| 5590 | M | M.NgoFQ20ORF3215P (98% identity) | CCACC | M.Ngo10531ORF5590P |
| 5595 | peptidylprolyl isomerase | |||
| Chromosome | ||||
| ??? | M | M.Ngo10562aORF5160P (100% identity) | M.Ngo10531aORFIP | |
| ??? | R | NgoFA19ORF379P (100% identity) | Ngo10531aORFIP | |
| ??? | R | Ngos1291ORF8455P (100% identity) | CCACC | Ngo10531aORFDP |
| ??? | M | M.NgoSH240ORFNP (100% identity) | CCACC | M.Ngo10531aORFDP |