Neisseria gonorrhoeae 10708 |
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Putative Neisseria gonorrhoeae 10708 RM systems
Ref: Shaskolskiy,B. and Kandinov,I. unpublished
REBASE ref # 35250
Complete sequence: 2,227,633 bp
GenBank #: CP106809
REBASE acronym: Ngo10708
Org_num: 62475
All begin OCL44_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2115 | ADP-glyceromanno-heptose 6-epimerase | |||
| 2120 | M | M.Ngos1291ORF7750P (100% identity) | GCANNNNNNNGTC | M.Ngo10708ORF2120P |
| 2125 | DNA damage-inducible protein D | |||
| 2130 | S | S.Ngo9460ORF2075P (100% identity) | GCANNNNNNNGTC | S.Ngo10708ORF2120P |
| 2135 | R | NgoN160ORF2075P (100% identity) | GCANNNNNNNGTC | Ngo10708ORF2120P |
| 2140 | ATP-dependent Clp protease ATP-binding subunit | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 30 | leucine--tRNA ligase | |||
| 35 | M | M1.Ngo9464ORF35P (100% identity) | GATC | M1.Ngo10708ORF35P |
| 40 | M | M2.Ngo9464ORF35P (100% identity) | GATC | M2.Ngo10708ORF35P |
| 45 | 184 aa hypothetical protein | |||
| 1580 | phenylalanine--tRNA ligase subunit alpha | |||
| 1585 | V | V.NgoWSORF391P (100% identity) | V.Ngo10708ORF1590P | |
| ??? | M | M.NgoWSORF391P (100% identity) | CCGG | M.Ngo10708ORF1590P |
| 1600 | R | NgoWSORF391P (100% identity) | CCGG | Ngo10708ORF1590P |
| 1605 | phenylalanine--tRNA ligase subunit beta | |||
| 1880 | IS1595 family transposase | |||
| 1885 | M | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | M.Ngo10708ORF1885P |
| 1890 | S | S.Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | S.Ngo10708ORF1885P |
| 1895 | 140 aa hypothetical protein | |||
| 1915 | uroporphyrinogen decarboxylase | |||
| 1920 | H | H.NgoN160ORF1885P (100% identity) | H.Ngo10708ORF1930P | |
| 1925 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo10708ORF1930P |
| 1930 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo10708ORF1930P |
| 1935 | DNA repair protein RadA | |||
| 3685 | 5-(carboxyamino)imidazole ribonucleotide | |||
| 3690 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | Ngo10708ORF3695P |
| 3695 | M | M.NgoWLORF1156P (100% identity) | GCCGGC | M.Ngo10708ORF3695P |
| 3700 | anthranilate synthase component I | |||
| 5020 | 3-isopropylmalate dehydratase small subunit | |||
| 5025 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo10708ORF5025P |
| 5030 | R | NgoWSORF784P (100% identity) | GGNNCC | Ngo10708ORF5025P |
| 5035 | 3-isopropylmalate dehydrogenase | |||
| 6195 | replication initiation factor domain-containing | |||
| 6200 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo10708ORF6215P | |
| 6205 | R | Ngo10819ORF6195BP (100% identity) | Ngo10708ORF6215BP | |
| 6210 | R | Ngo10819ORF6195AP (100% identity) | Ngo10708ORF6215AP | |
| ??? | M | M.NgoSH240ORFLP (100% identity) | CCGG | M.Ngo10708ORF6215P |
| 6225 | 48 aa hypothetical protein | |||
| 6415 | excinuclease ABC subunit UvrA | |||
| 6420 | R | Ngos1291ORF260P (100% identity) | CCGCGG | Ngo10708ORF6425P |
| 6425 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.Ngo10708ORF6425P |
| 6430 | 62 aa hypothetical protein | |||
| 9835 | cysteine--tRNA ligase | |||
| 9840 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | Ngo10708ORF9845P |
| 9845 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.Ngo10708ORF9845P |
| 9850 | GTPase ObgE | |||
| 10395 | RNA-binding transcriptional accessory protein | |||
| 10400 | M | M2.Ngos1291II (100% identity) | GGTGA | M1.Ngo10708ORF10400P |
| 10405 | M | M1.NgoFQ35ORF11380P (100% identity) | GGTGA | M2.Ngo10708ORF10400P |
| 10410 | R | NgoWSIIIP (100% identity) | GGTGA | Ngo10708ORF10400P |
| 10415 | 93 aa hypothetical protein | |||
| 10970 | ribosome recycling factor | |||
| 10975 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.Ngo10708ORF10975P |
| 10980 | R | Ngos1291ORF3515P (100% identity) | GGCC | Ngo10708ORF10975P |
| 10985 | FUSC family protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5205 | tRNA pseudouridine(55) synthase TruB | |||
| ??? | M | M.Ngo10736ORF5175P (99% identity) | M.Ngo10708ORF5210P | |
| 5220 | R | Ngo9464ORF5170P (100% identity) | Ngo10708ORF5210P | |
| 5225 | alpha-hydroxy-acid oxidizing protein | |||
| 5680 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
| 5685 | R | Ngos1291ORF8455P (100% identity) | CCACC | Ngo10708ORF5690P |
| 5690 | M | M.NgoSH240ORFNP (100% identity) | CCACC | M.Ngo10708ORF5690P |
| 5695 | peptidylprolyl isomerase | |||