Neisseria gonorrhoeae 10743 |
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Putative Neisseria gonorrhoeae 10743 RM systems
Ref: Shaskolskiy,B. and Kandinov,I. unpublished
REBASE ref # 35250
Complete sequence: 2,227,249 bp
GenBank #: CP106805
REBASE acronym: Ngo10743
Org_num: 62479
All begin OCL39_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3440 | replication-associated recombination protein A | |||
| 3445 | R | Ngo9464ORF4845P (100% identity) | GAGNNNNNTAC | Ngo10743ORF3470P |
| 3450 | hydroxyacid dehydrogenase | |||
| 3455 | S | S.Ngo9458ORF4865P (100% identity) | GAGNNNNNTAC | S.Ngo10743ORF3470P |
| 3460 | 186 aa hypothetical protein | |||
| 3465 | 280 aa hypothetical protein | |||
| 3470 | M | M.Ngo10819ORF4875P (100% identity) | GAGNNNNNTAC | M.Ngo10743ORF3470P |
| 3475 | ABC transporter | |||
| 6220 | ATP-dependent Clp protease ATP-binding subunit | |||
| 6225 | R | NgoN160ORF2075P (100% identity) | GCANNNNNNNGTC | Ngo10743ORF6240P |
| 6230 | S | S.Ngo9460ORF2075P (100% identity) | GCANNNNNNNGTC | S.Ngo10743ORF6240P |
| 6235 | DNA damage-inducible protein D | |||
| 6240 | M | M.Ngos1291ORF7750P (100% identity) | GCANNNNNNNGTC | M.Ngo10743ORF6240P |
| 6245 | ADP-glyceromanno-heptose 6-epimerase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 30 | leucine--tRNA ligase | |||
| 35 | M | M1.Ngo9464ORF35P (100% identity) | GATC | M1.Ngo10743ORF35P |
| 40 | M | M2.Ngo9464ORF35P (100% identity) | GATC | M2.Ngo10743ORF35P |
| 45 | 184 aa hypothetical protein | |||
| 1925 | 62 aa hypothetical protein | |||
| 1930 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.Ngo10743ORF1930P |
| 1935 | R | Ngos1291ORF260P (100% identity) | CCGCGG | Ngo10743ORF1930P |
| 1940 | excinuclease ABC subunit UvrA | |||
| 2130 | 48 aa hypothetical protein | |||
| ??? | M | M.Ngos1291ORF65P (100% identity) | M.Ngo10743ORF2135P | |
| ??? | R | NgoWSORF1801P (97% identity) | Ngo10743ORF2135P | |
| 2155 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo10743ORF2135P | |
| 2160 | replication initiation factor domain-containing | |||
| 3325 | 3-isopropylmalate dehydrogenase | |||
| 3330 | R | NgoWSORF784P (100% identity) | GGNNCC | Ngo10743ORF3335P |
| 3335 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo10743ORF3335P |
| 3340 | 3-isopropylmalate dehydratase small subunit | |||
| 4650 | anthranilate synthase component I | |||
| 4655 | M | M.NgoWLORF1156P (100% identity) | GCCGGC | M.Ngo10743ORF4655P |
| 4660 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | Ngo10743ORF4655P |
| 4665 | 5-(carboxyamino)imidazole ribonucleotide | |||
| 6425 | DNA repair protein RadA | |||
| 6430 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo10743ORF6430P |
| 6435 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo10743ORF6430P |
| 6440 | H | H.NgoN160ORF1885P (100% identity) | H.Ngo10743ORF6430P | |
| 6445 | uroporphyrinogen decarboxylase | |||
| 6465 | 140 aa hypothetical protein | |||
| 6470 | S | S.Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | S.Ngo10743ORF6475P |
| 6475 | M | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | M.Ngo10743ORF6475P |
| 6480 | IS1595 family transposase | |||
| 6750 | phenylalanine--tRNA ligase subunit beta | |||
| 6755 | R | NgoWSORF391P (100% identity) | CCGG | Ngo10743ORF6760P |
| ??? | M | M.NgoWSORF391P (100% identity) | CCGG | M.Ngo10743ORF6760P |
| 6770 | V | V.NgoWSORF391P (100% identity) | V.Ngo10743ORF6760P | |
| 6775 | phenylalanine--tRNA ligase subunit alpha | |||
| 9805 | cysteine--tRNA ligase | |||
| 9810 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | Ngo10743ORF9815P |
| 9815 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.Ngo10743ORF9815P |
| 9820 | GTPase ObgE | |||
| 10360 | RNA-binding transcriptional accessory protein | |||
| 10365 | M | M2.Ngos1291II (100% identity) | GGTGA | M1.Ngo10743ORF10365P |
| 10370 | M | M1.NgoFQ35ORF11380P (100% identity) | GGTGA | M2.Ngo10743ORF10365P |
| 10375 | R | NgoWSIIIP (100% identity) | GGTGA | Ngo10743ORF10365P |
| 10380 | 93 aa hypothetical protein | |||
| 10935 | ribosome recycling factor | |||
| 10940 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.Ngo10743ORF10940P |
| ??? | R | NgoSW0223ORF9065P (100% identity) | GGCC | Ngo10743ORF10940P |
| 10955 | FUSC family protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3135 | alpha-hydroxy-acid oxidizing protein | |||
| 3140 | R | Ngo9464ORF5170P (100% identity) | Ngo10743ORF3145P | |
| ??? | M | M.Ngo10819ORF5195P (99% identity) | M.Ngo10743ORF3145P | |
| 3155 | tRNA pseudouridine(55) synthase TruB | |||