Neisseria gonorrhoeae 10744 |
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Putative Neisseria gonorrhoeae 10744 RM systems
Ref: Shaskolskiy,B. and Kandinov,I. unpublished
REBASE ref # 35250
Complete sequence: 2,228,933 bp
GenBank #: CP106801
REBASE acronym: Ngo10744
Org_num: 62480
All begin OCL43_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2080 | ADP-glyceromanno-heptose 6-epimerase | |||
| 2085 | M | M.Ngos1291ORF7750P (100% identity) | GCANNNNNNNGTC | M.Ngo10744ORF2085P |
| 2090 | DNA damage-inducible protein D | |||
| 2095 | S | S.Ngo9460ORF2075P (100% identity) | GCANNNNNNNGTC | S.Ngo10744ORF2085P |
| 2100 | R | NgoN160ORF2075P (100% identity) | GCANNNNNNNGTC | Ngo10744ORF2085P |
| 2105 | ATP-dependent Clp protease ATP-binding subunit | |||
| 4880 | ABC transporter | |||
| 4885 | M | M.Ngo10819ORF4875P (100% identity) | GAGNNNNNTAC | M.Ngo10744ORF4885P |
| 4890 | 280 aa hypothetical protein | |||
| 4895 | 186 aa hypothetical protein | |||
| 4900 | S | S.Ngo9458ORF4865P (100% identity) | GAGNNNNNTAC | S.Ngo10744ORF4885P |
| 4905 | hydroxyacid dehydrogenase | |||
| 4910 | R | Ngo9464ORF4845P (100% identity) | GAGNNNNNTAC | Ngo10744ORF4885P |
| 4915 | replication-associated recombination protein A | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 30 | leucine--tRNA ligase | |||
| 35 | M | M1.Ngo9464ORF35P (100% identity) | GATC | M1.Ngo10744ORF35P |
| 40 | M | M2.Ngo9464ORF35P (100% identity) | GATC | M2.Ngo10744ORF35P |
| 45 | 184 aa hypothetical protein | |||
| 1550 | phenylalanine--tRNA ligase subunit alpha | |||
| 1555 | V | V.NgoWSORF391P (100% identity) | V.Ngo10744ORF1560P | |
| ??? | M | M.NgoWSORF391P (100% identity) | CCGG | M.Ngo10744ORF1560P |
| 1570 | R | NgoWSORF391P (100% identity) | CCGG | Ngo10744ORF1560P |
| 1575 | phenylalanine--tRNA ligase subunit beta | |||
| 1845 | IS1595 family transposase | |||
| 1850 | M | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | M.Ngo10744ORF1850P |
| 1855 | S | S.Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | S.Ngo10744ORF1850P |
| 1860 | 140 aa hypothetical protein | |||
| 1880 | uroporphyrinogen decarboxylase | |||
| 1885 | H | H.NgoN160ORF1885P (100% identity) | H.Ngo10744ORF1895P | |
| 1890 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo10744ORF1895P |
| 1895 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo10744ORF1895P |
| 1900 | DNA repair protein RadA | |||
| 3655 | 5-(carboxyamino)imidazole ribonucleotide | |||
| 3660 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | Ngo10744ORF3665P |
| 3665 | M | M.NgoWLORF1156P (100% identity) | GCCGGC | M.Ngo10744ORF3665P |
| 3670 | anthranilate synthase component I | |||
| 5015 | 3-isopropylmalate dehydratase small subunit | |||
| 5020 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo10744ORF5020P |
| 5025 | R | NgoWSORF784P (100% identity) | GGNNCC | Ngo10744ORF5020P |
| 5030 | 3-isopropylmalate dehydrogenase | |||
| 6180 | replication initiation factor domain-containing | |||
| 6185 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo10744ORF6200P | |
| 6190 | R | Ngo10819ORF6195BP (100% identity) | Ngo10744ORF6200BP | |
| 6195 | R | Ngo10819ORF6195AP (100% identity) | Ngo10744ORF6200AP | |
| ??? | M | M.Ngos1291ORF65P (100% identity) | M.Ngo10744ORF6200P | |
| 6210 | 48 aa hypothetical protein | |||
| 6400 | excinuclease ABC subunit UvrA | |||
| 6405 | R | Ngos1291ORF260P (100% identity) | CCGCGG | Ngo10744ORF6410P |
| 6410 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.Ngo10744ORF6410P |
| 6415 | 62 aa hypothetical protein | |||
| 9820 | cysteine--tRNA ligase | |||
| 9825 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | Ngo10744ORF9830P |
| 9830 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.Ngo10744ORF9830P |
| 9835 | GTPase ObgE | |||
| 10380 | RNA-binding transcriptional accessory protein | |||
| 10385 | M | M2.Ngos1291II (100% identity) | GGTGA | M1.Ngo10744ORF10385P |
| 10390 | M | M1.NgoFQ35ORF11380P (100% identity) | GGTGA | M2.Ngo10744ORF10385P |
| 10395 | R | NgoWSIIIP (100% identity) | GGTGA | Ngo10744ORF10385P |
| 10400 | 93 aa hypothetical protein | |||
| 10950 | ribosome recycling factor | |||
| 10955 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.Ngo10744ORF10955P |
| ??? | R | NgoSW0223ORF9065P (100% identity) | GGCC | Ngo10744ORF10955P |
| 10970 | FUSC family protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5200 | tRNA pseudouridine(55) synthase TruB | |||
| ??? | M | M.Ngo10819ORF5195P (100% identity) | M.Ngo10744ORF5205P | |
| 5215 | R | Ngo9464ORF5170P (100% identity) | Ngo10744ORF5205P | |
| 5220 | alpha-hydroxy-acid oxidizing protein | |||