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Putative Neisseria gonorrhoeae 10538 RM systems
Ref: Shaskolskiy,B. and Kandinov,I. unpublished
REBASE ref # 35250
Complete sequence: 2,223,795 bp
GenBank #: CP104548
REBASE acronym: Ngo10538
Org_num: 62276
All begin NDL69_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
2400 | ADP-glyceromanno-heptose 6-epimerase | |||
2405 | M | M.NgoSW0002ORF2090P (100% identity) | M.Ngo10538ORF2405P | |
2410 | DNA damage-inducible protein D | |||
2415 | S | S1.NgoWOORF429P (100% identity) | GCANNNNNNNNTGC | S1.Ngo10538ORF2405P |
2420 | S | S2.NgoN160ORF2075P (100% identity) | GCANNNNNNNNTGC | S2.Ngo10538ORF2405P |
2425 | R | Ngo9035ORF2405P (100% identity) | Ngo10538ORF2405P | |
2430 | ATP-dependent Clp protease ATP-binding subunit | |||
5210 | ABC transporter | |||
5215 | M | M.NgoWSI (100% identity) | GAGNNNNNTAC | M.Ngo10538ORF5215P |
5220 | 206 aa hypothetical protein | |||
5225 | 186 aa hypothetical protein | |||
5230 | S | S.NgoWSI (100% identity) | GAGNNNNNTAC | S.Ngo10538ORF5215P |
5235 | hydroxyacid dehydrogenase | |||
5240 | R | NgoWPIP (99% identity) | GAGNNNNNTAC | Ngo10538ORF5215P |
5245 | replication-associated recombination protein A | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
30 | leucine--tRNA ligase | |||
35 | R | Ngos1291ORF5750P (100% identity) | GATC | Ngo10538ORF35P |
40 | site-specific DNA-methyltransferase | |||
35 | restriction endonuclease | |||
40 | M | M.NgoWPORF8P (93% identity) | GATC | M.Ngo10538ORF40P |
45 | 184 aa hypothetical protein | |||
1240 | 62 aa hypothetical protein | |||
1245 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.Ngo10538ORF1245P |
1250 | R | Ngos1291ORF260P (100% identity) | CCGCGG | Ngo10538ORF1245P |
1255 | excinuclease ABC subunit UvrA | |||
1865 | phenylalanine--tRNA ligase subunit alpha | |||
1870 | V | V.NgoWSORF391P (100% identity) | V.Ngo10538ORF1875P | |
??? | M | M.NgoWSORF391P (100% identity) | CCGG | M.Ngo10538ORF1875P |
1885 | R | NgoWSORF391P (100% identity) | CCGG | Ngo10538ORF1875P |
1890 | phenylalanine--tRNA ligase subunit beta | |||
2170 | N-6 DNA methylase | |||
2175 | S | S.NgoWSORF450P (100% identity) | GACNNNNNTGA | S.Ngo10538ORF2175P |
2180 | 140 aa hypothetical protein | |||
2200 | uroporphyrinogen decarboxylase | |||
2205 | H | H.NgoN160ORF1885P (100% identity) | H.Ngo10538ORF2215P | |
2210 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo10538ORF2215P |
2215 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo10538ORF2215P |
2220 | DNA repair protein RadA | |||
4015 | 5-(carboxyamino)imidazole ribonucleotide | |||
4020 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | Ngo10538ORF4025P |
4025 | M | M.Ngos1291ORF10080P (100% identity) | GCCGGC | M.Ngo10538ORF4025P |
4030 | anthranilate synthase component I | |||
5350 | 3-isopropylmalate dehydratase small subunit | |||
5355 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo10538ORF5355P |
5360 | R | NgoWSORF784P (100% identity) | GGNNCC | Ngo10538ORF5355P |
5365 | 3-isopropylmalate dehydrogenase | |||
8565 | replication initiation factor domain-containing | |||
8570 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo10538ORF8585P | |
??? | R | Ngos1291ORF65P (100% identity) | CCGG | Ngo10538ORF8585P |
??? | M | M.NgoSH240ORFLP (100% identity) | CCGG | M.Ngo10538ORF8585P |
8595 | 48 aa hypothetical protein | |||
9765 | cysteine--tRNA ligase | |||
9770 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | Ngo10538ORF9775P |
9775 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.Ngo10538ORF9775P |
9780 | GTPase ObgE | |||
10300 | RNA-binding transcriptional accessory protein | |||
10305 | M | M1.NgoWSIII (100% identity) | GGTGA | M1.Ngo10538ORF10305P |
10310 | M | M1.Ngos1291II (100% identity) | GGTGA | M2.Ngo10538ORF10305P |
10315 | R | NgoWSIIIP (100% identity) | GGTGA | Ngo10538ORF10305P |
10320 | 93 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
5535 | tRNA pseudouridine(55) synthase TruB | |||
??? | M | M.NgoTFGA2ORF1011P (99% identity) | M.Ngo10538ORF5540P | |
5555 | R | NgoNCORF1272P (100% identity) | Ngo10538ORF5540P | |
5560 | alpha-hydroxy-acid oxidizing protein | |||
6010 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
6015 | R | NgoWPIIP (100% identity) | Ngo10538ORF6020P | |
6020 | M | M.NgoHL122ORF2795P (100% identity) | M.Ngo10538ORF6020P | |
6025 | peptidylprolyl isomerase |