Avibacterium paragallinarum AP-2 |
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Putative Avibacterium paragallinarum AP-2 RM systems
Ref: Hashish,A. et al. unpublished
REBASE ref # 35359
Complete sequence: 2,529,853 bp
GenBank #: CP104917
REBASE acronym: ApaAP2
Org_num: 62202
All begin N8E87_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3055 | ATP-binding protein | |||
| 3060 | R | HgaORFAP (96% identity) | ApaAP2ORF3075P | |
| 3065 | FRG domain-containing protein | |||
| 3070 | S | S.Gan12ORF12055P (56% identity) | S.ApaAP2ORF3075P | |
| 3075 | M | M.ApaCLORF7570P (73% identity) | M.ApaAP2ORF3075P | |
| 3080 | molecular chaperone DnaK | |||
| 11225 | 78 aa hypothetical protein | |||
| 11230 | M | M.Gan49310ORF10495P (98% identity) | M.ApaAP2ORF11230P | |
| 11235 | S | S.Ssp587ORF18275P (71% identity) | S1.ApaAP2ORF11230P | |
| 11240 | virulence RhuM family protein | |||
| 11245 | GIY-YIG nuclease family protein | |||
| 11250 | DNA binding domain-containing protein | |||
| 11255 | R | Apap4ORF12165P (99% identity) | ApaAP2ORF11230P | |
| 11260 | S | S.Jsp173ORF1520P (63% identity) | S2.ApaAP2ORF11230P | |
| 11265 | S | S3.Apap4ORF12165P (99% identity) | S3.ApaAP2ORF11230P | |
| 11270 | MFS transporter | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1775 | phosphoglycerate dehydrogenase | |||
| 1780 | RM | Gan12ORF4930P (89% identity) | ApaAP2ORF1780P | |
| 1785 | endolytic transglycosylase MltG | |||
| 3310 | AlpA family phage regulatory protein | |||
| 3315 | M | M.ApaAP01ORF7020P (28% identity) | M.ApaAP2ORF3315P | |
| 3320 | KilA-N domain-containing protein | |||
| 5030 | 62 aa hypothetical protein | |||
| 5035 | M | M.ApaAP2ORF6500P (99% identity) | M.ApaAP2ORF5035P | |
| 5040 | DNA methyltransferase | |||
| 6010 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
| 6015 | R | Hha8540ORF444P (87% identity) | ApaAP2ORF6020P | |
| 6020 | M | M.Ssp72ORF7430P (89% identity) | M.ApaAP2ORF6020P | |
| 6025 | NlpC/P60 family protein | |||
| 6495 | DNA methyltransferase | |||
| 6500 | M | M.ApaAP2ORF5035P (99% identity) | M.ApaAP2ORF6500P | |
| 6505 | 62 aa hypothetical protein | |||
| 7340 | ArsC family reductase | |||
| 7345 | M | M2.ApaESV135ORF3980P (99% identity) | M.ApaAP2ORF7345P | |
| 7350 | R | ApasMORFGP (99% identity) | ApaAP2ORF7345P | |
| 7355 | DNA methyltransferase | |||
| 7350 | restriction endonuclease | |||
| 7355 | M | M1.ApaESV135ORF3980P (99% identity) | M.ApaAP2ORF7355P | |
| 7360 | threonine synthase | |||
| 11765 | 153 aa hypothetical protein | |||
| 11770 | M | M1.Uav33940ORF7P (95% identity) | M1.ApaAP2ORF11770P | |
| ??? | M | M2.Uav33940ORF7P (86% identity) | M2.ApaAP2ORF11770P | |
| 11785 | RM | Uav33940ORF7P (92% identity) | ApaAP2ORF11770P | |
| 11790 | 30S ribosomal protein S12 methylthiotransferase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7535 | R | ApaCLORF7425P (97% identity) | ApaAP2ORF7540P | |
| ??? | M | M.ApaMORFBP (68% identity) | M.ApaAP2ORF7540P | |
| 7550 | LysR substrate-binding domain-containing | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 485 | 3-dehydroquinate synthase | |||
| 490 | M | M.ApasMORFNP (99% identity) | M.ApaAP2ORF490P | |
| 495 | DciA family protein | |||