Avibacterium paragallinarum AG21-0333 |
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Putative Avibacterium paragallinarum AG21-0333 RM systems
Ref: Hashish,A. et al. unpublished
REBASE ref # 35359
Complete sequence: 2,399,548 bp
GenBank #: CP104914
REBASE acronym: Apa333
Org_num: 62201
All begin N8E86_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 925 | SIR2 family protein | |||
| 930 | R | ApaAP2ORF11230P (99% identity) | Apa333ORF940P | |
| 935 | S | S.Ppo25ORF4830P (39% identity) | S2.Apa333ORF940P | |
| 940 | M | M.Uav33940II (99% identity) | M.Apa333ORF940P | |
| 945 | S | S1.GanBJF12ORF12720P (59% identity) | S1.Apa333ORF940P | |
| 950 | S | S1.ApaESV135ORF11005P (100% identity) | S3.Apa333ORF940P | |
| 955 | MFS transporter | |||
| 1305 | DUF927 domain-containing protein | |||
| 1310 | R | ApaAP2ORF11565P (90% identity) | Apa333ORF1325P | |
| 1315 | 364 aa hypothetical protein | |||
| 1320 | S | S.Gan49310ORF915P (64% identity) | S.Apa333ORF1325P | |
| 1325 | M | M.Apap4ORF12860P (81% identity) | M.Apa333ORF1325P | |
| 1330 | 46 aa hypothetical protein | |||
| 4450 | ATP-binding protein | |||
| 4455 | R | Aav11297IP (98% identity) | Apa333ORF4470P | |
| 4460 | FRG domain-containing protein | |||
| 4465 | S | S.Aav11297I (63% identity) | S.Apa333ORF4470P | |
| 4470 | M | M.HgaORFAP (92% identity) | M.Apa333ORF4470P | |
| 4475 | 45 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1525 | 153 aa hypothetical protein | |||
| 1530 | M | Apa4211ORF480AP (98% identity) | M1.Apa333ORF1530P | |
| 1535 | M | M2.Asp21595ORF10940P (91% identity) | M2.Apa333ORF1530P | |
| 1540 | RM | Apap4ORF13055P (99% identity) | Apa333ORF1530P | |
| 1545 | 30S ribosomal protein S12 methylthiotransferase | |||
| 3155 | phosphoglycerate dehydrogenase | |||
| 3160 | RM | Gan49310ORF1435P (85% identity) | Apa333ORF3160P | |
| 3165 | 48 aa hypothetical protein | |||
| 4785 | DNA methyltransferase | |||
| 4790 | M | M1.ApaCLORF9750P (97% identity) | M.Apa333ORF4790P | |
| 4795 | 62 aa hypothetical protein | |||
| 7545 | ArsC family reductase | |||
| 7550 | M | M.Asp21595ORF8555P (86% identity) | M.Apa333ORF7550P | |
| 7555 | R | ApaAP2ORF7345P (90% identity) | Apa333ORF7550P | |
| 7560 | DNA methyltransferase | |||
| 7555 | restriction endonuclease | |||
| 7560 | M | M1.ApaESV135ORF3980P (97% identity) | M.Apa333ORF7560P | |
| 7565 | threonine synthase | |||
| 9775 | DciA family protein | |||
| 9780 | M | M.ApasMORFNP (100% identity) | GATC | M.Apa333ORF9780P |
| 9785 | 3-dehydroquinate synthase | |||
| 9900 | SPFH domain-containing protein | |||
| 9905 | M | M2.Apap4ORF7445P (84% identity) | M.Apa333ORF9905P | |
| 9910 | KilA-N domain-containing protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7710 | R | ApaAP2ORF7540P (96% identity) | Apa333ORF7715P | |
| 7715 | M | M.ApaAP2ORF7540P (36% identity) | M.Apa333ORF7715BP | |
| 7720 | M | M.Apap4ORF2990P (38% identity) | M.Apa333ORF7715AP | |
| 7725 | LysR substrate-binding domain-containing | |||