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Putative Escherichia coli DFS.1 RM systems
Ref: Sun,Y. unpublished
REBASE ref # 32922
Sequence length: | GenBank #: | |
Chromosome: | 4,944,989 bp | CP104846 |
plasmid unnamed1: | 92,732 bp | CP104847 |
REBASE acronym: EcoDFS1
Org_num: 62241
All begin N7219_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
4050 | endoribonuclease SymE | |||
4055 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoDFS1ORF4065P |
4060 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoDFS1ORF4065P |
4065 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoDFS1ORF4065P |
4070 | restriction endonuclease | |||
6245 | ash family protein | |||
6250 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoDFS1ORF6255P |
6255 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoDFS1ORF6255P |
6260 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoDFS1ORF6255P |
6265 | type IV toxin-antitoxin system AbiEi family | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
1700 | cell division protein DamX | |||
1705 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoDFS1DamP |
1710 | ribulose-phosphate 3-epimerase | |||
2300 | DUF2556 family protein | |||
2305 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoDFS1ORF2305P |
2310 | DNA-binding transcriptional regulator Fis | |||
4275 | PerC family transcriptional regulator | |||
4280 | M | M.Sso30ORF925P (100% identity) | GATC | M.EcoDFS1ORF4280P |
4285 | LexA family transcriptional regulator | |||
4310 | 67 aa hypothetical protein | |||
4315 | M | M.Ecoppa6ORF4450P (100% identity) | M.EcoDFS1ORF4315P | |
4320 | 63 aa hypothetical protein | |||
9730 | 71 aa hypothetical protein | |||
9735 | M | M.KpnYN1ORFGP (89% identity) | M.EcoDFS1ORF9735P | |
9740 | helix-turn-helix domain-containing protein | |||
11995 | TrmB family transcriptional regulator | |||
12000 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoDFS1ORF12000P |
12015 | DUF3927 family protein | |||
plasmid unnamed1 | ||||
24470 | 103 aa hypothetical protein | |||
24475 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoDFS1ORF24475P |
24480 | 73 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
4065 | type I restriction-modification system subunit | |||
4070 | R | Ecou021MrrP (100% identity) | EcoDFS1MrrP | |
4075 | BrnT family toxin |