Escherichia coli E7 |
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Putative Escherichia coli E7 RM systems
Ref: Feng,A. et al. unpublished
REBASE ref # 35294
Complete sequence: 5,177,086 bp
GenBank #: CP104523
REBASE acronym: EcoE7
Org_num: 61962
All begin N5O80_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2400 | AAA family ATPase | |||
| 2405 | S | S.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | S.EcoE7ORF2410P |
| 2410 | M | M.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | M.EcoE7ORF2410P |
| 2415 | R | EcoPSUO78ORF23890P (100% identity) | TGANNNNNNCTTC | EcoE7ORF2410P |
| 2420 | transposase | |||
| 2795 | endoribonuclease SymE | |||
| 2800 | R | Ecos641ORF3050P (100% identity) | GATANNNNNNTAG | EcoE7ORF2810P |
| 2805 | S | S.Ecos641ORF3050P (100% identity) | GATANNNNNNTAG | S.EcoE7ORF2810P |
| 2810 | M | M.Ecos641ORF3050P (100% identity) | GATANNNNNNTAG | M.EcoE7ORF2810P |
| 2815 | restriction endonuclease | |||
| 19310 | lactate utilization protein C | |||
| 19315 | R | EcoE7ORF23645P (100% identity) | EcoE7ORF19325P | |
| 19320 | S | S.Ecos641ORF18845P (100% identity) | S.EcoE7ORF19325P | |
| 19325 | M | M.Ecos641ORF18845P (99% identity) | M.EcoE7ORF19325P | |
| 19330 | DNA-binding protein | |||
| 23630 | IS66 family transposase | |||
| 23635 | R | EcoE7ORF19325P (100% identity) | GACNNNNNTRRG | EcoE7ORF23645P |
| 23640 | S | S.EcoS19651ORF13565P (100% identity) | GACNNNNNTRRG | S.EcoE7ORF23645P |
| 23645 | M | M.EcoS19651ORF13565P (100% identity) | GACNNNNNTRRG | M.EcoE7ORF23645P |
| 23650 | DNA-binding protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20 | 318 aa hypothetical protein | |||
| 25 | M | M.Ecos641ORF25P (100% identity) | GGCC | M.EcoE7ORF25P |
| 30 | phage portal protein | |||
| 2615 | peptidase | |||
| 2620 | R | Ecos641ORF2855P (100% identity) | EcoE7ORF2620P | |
| 2625 | HNH endonuclease | |||
| 7275 | recombination protein NinB | |||
| ??? | M | M.Eco53ORFCP (100% identity) | GATC | M.EcoE7ORF7280P |
| 7290 | DUF2591 family protein | |||
| 13715 | drug/metabolite exporter YedA | |||
| 13720 | V | V.EcosEC7DcmP (100% identity) | CCWGG | V.EcoE7DcmP |
| 13725 | M | M.SdySWHE2DcmP (100% identity) | CCWGG | M.EcoE7DcmP |
| 13730 | phosphohydrolase | |||
| 21295 | DNA-binding transcriptional regulator Fis | |||
| 21300 | M | M.EcosS1ORF18905P (100% identity) | ATGCAT | M.EcoE7ORF21300P |
| 21305 | DUF2556 family protein | |||
| 21895 | ribulose-phosphate 3-epimerase | |||
| 21900 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoE7DamP |
| 21905 | cell division protein DamX | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2810 | type I restriction-modification system subunit | |||
| 2815 | R | EfeE4C07MrrP (100% identity) | EcoE7MrrP | |
| 2820 | BrnT family toxin | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 16975 | PerC family transcriptional regulator | |||
| 16980 | M | M.SflFF34ORF8575P (100% identity) | GATC | M.EcoE7ORF16980P |
| 16985 | serine/threonine protein phosphatase | |||