Raoultella ornithinolytica MQB_Silv_108 |
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Putative Raoultella ornithinolytica MQB_Silv_108 RM systems
Ref: Quintela-Baluja,M. unpublished
REBASE ref # 35303
| Sequence length: | GenBank #: | |
| Chromosome: | 5,775,339 bp | CP104450 |
| plasmid pIncA_Silv108: | 148,888 bp | CP104451 |
| plasmid pIncFII_Silv108: | 128,787 bp | CP104453 |
| plasmid pMQB_Silv108.6: | 2,150 bp | CP104462 |
REBASE acronym: Ror108
Org_num: 61987
All begin N2J37_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1810 | cell division protein DamX | |||
| 1815 | M | M.RspXY1DamP (100% identity) | GATC | M.Ror108DamP |
| 1820 | ribulose-phosphate 3-epimerase | |||
| 3205 | helix-turn-helix domain-containing protein | |||
| 3210 | RM | Ero1505ORF2985P (99% identity) | Ror108ORF3210P | |
| 3215 | AAA family ATPase | |||
| 6780 | 64 aa hypothetical protein | |||
| 6785 | M | M.RorNC189ORF9710P (96% identity) | M.Ror108ORF6785P | |
| 6790 | PerC family transcriptional regulator | |||
| 7640 | helix-turn-helix domain-containing protein | |||
| 7645 | M | M.Rsp9189ORF3007P (84% identity) | M.Ror108ORF7645P | |
| 7650 | LexA family transcriptional regulator | |||
| 9715 | phosphohydrolase | |||
| 9720 | M | M.Rpl13096DcmP (91% identity) | M.Ror108DcmP | |
| 9725 | V | V.RspXY1DcmP (100% identity) | V.Ror108DcmP | |
| 9730 | drug/metabolite exporter YedA | |||
| 9940 | conserved phage C-terminal domain-containing | |||
| 9945 | M | M.Ror24150ORF14185P (99% identity) | M.Ror108ORF9945P | |
| 9950 | RusA family crossover junction | |||
| 13200 | 73 aa hypothetical protein | |||
| 13205 | M | M.KpnFF62ORF14370P (98% identity) | M.Ror108ORF13205P | |
| 13210 | DUF1317 domain-containing protein | |||
| 13870 | recombination protein NinG | |||
| 13875 | M | M.RorFF15ORF12690P (94% identity) | M.Ror108ORF13875P | |
| 13880 | 203 aa hypothetical protein | |||
| 18660 | 196 aa hypothetical protein | |||
| 18665 | M | M.Rsp2415ORFCP (100% identity) | M.Ror108ORF18665P | |
| 18670 | recombination protein NinG | |||
| 24955 | 73 aa hypothetical protein | |||
| 24960 | M | M.Kox2118ORF24830P (96% identity) | M.Ror108ORF24960P | |
| 24965 | 50 aa hypothetical protein | |||
| plasmid pIncA_Silv108 | ||||
| 28080 | 143 aa hypothetical protein | |||
| 28085 | M | M.Sma0cORF5065P (100% identity) | CCNGG | M.Ror108ORF28085P |
| 28090 | 100 aa hypothetical protein | |||
| 28735 | recombinase family protein | |||
| 28740 | M | M.SmaY426ORF27P (100% identity) | CTGCAG | M.Ror108ORF28740P |
| 28745 | R | SmaY426ORF27P (100% identity) | CTGCAG | Ror108ORF28740P |
| 28750 | 82 aa hypothetical protein | |||
| plasmid pIncFII_Silv108 | ||||
| 30250 | 73 aa hypothetical protein | |||
| 30255 | M | M.SmaQC11ORF52800P (100% identity) | M.Ror108ORF30255P | |
| 30260 | 56 aa hypothetical protein | |||
| plasmid pMQB_Silv108.6 | ||||
| 30975 | R | Kpn20001ORF29210P (100% identity) | GACGTC | Ror108ORF30980P |
| 30980 | M | M.Kpn7160ORF29660P (99% identity) | M.Ror108ORF30980P | |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9465 | SpnT protein | |||
| 9470 | M | M.Kqu47ORF25460P (99% identity) | M.Ror108ORF9470P | |
| 9475 | R | Eho286IIP (96% identity) | Ror108ORF9470P | |
| 9480 | shufflon system plasmid conjugative transfer | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3210 | N-6 DNA methylase | |||
| 3215 | R | Kmi581McrBP (99% identity) | Ror108McrBP | |
| 3220 | R | Kmi581McrCP (100% identity) | Ror108McrCP | |
| 3225 | GTPase family protein | |||