Campylobacter species RM16187 |
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Putative Campylobacter species RM16187 RM systems
Ref: Miller,W.G. et al. unpublished
REBASE ref # 20543
| Sequence length: | GenBank #: | |
| Chromosome: | 1,949,753 bp | CP012549 |
| plasmid p16187MP1: | 47,050 bp | CP012550 |
REBASE acronym: Csp16187
Org_num: 61939
All begin CDOMF_, CDOMF_a
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 442 | 559 aa hypothetical protein | |||
| 443 | R | Ccu92ORF2008P (97% identity) | Csp16187ORF444P | |
| 444 | M | M.Ccu92ORF2008P (96% identity) | M.Csp16187ORF444P | |
| 445 | S | S2.Csp16187ORF444P (62% identity) | S1.Csp16187ORF444P | |
| 446 | site-specific recombinase, phage integrase | |||
| 447 | S | S1.Csp16187ORF444P (62% identity) | S2.Csp16187ORF444P | |
| 448 | toxin-antitoxin system, antitoxin | |||
| 453 | transcriptional regulator, XRE family | |||
| 454 | M | M.Pan8628AORF174P (80% identity) | M.Csp16187ORF454P | |
| 455 | S | S.DdeGORF2868P (37% identity) | S.Csp16187ORF454P | |
| 456 | R | Pan8628AORF174P (84% identity) | Csp16187ORF454P | |
| 457 | mobilization protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 88 | aerobic ribonucleoside-diphosphate reductase Ia, | |||
| 89 | R | Vpu64585ORF8595P (59% identity) | Csp16187ORF90P | |
| 90 | M | M.Mla7911ORF1885P (70% identity) | M.Csp16187ORF90P | |
| 91 | chorismate synthase | |||
| 257 | DpnD/PcfM-like protein | |||
| 258 | R | CshVTPPORFEP (74% identity) | Csp16187ORF259P | |
| 259 | M | M.Csp16192ORF1705P (97% identity) | M.Csp16187ORF259P | |
| 260 | membrane protein, putative permease | |||
| 961 | single-stranded DNA-binding protein | |||
| 962 | M | M.CcoP1O2ORF1100P (75% identity) | M.Csp16187ORF962P | |
| 963 | 55 aa hypothetical protein | |||
| 1214 | HNH endonuclease domain protein | |||
| 1215 | M | M.Ial16511ORF2629P (56% identity) | M.Csp16187ORF1215P | |
| 1216 | hydroxymethylbilane synthase | |||
| 1810 | molybdopterin-containing oxidoreductase III, | |||
| 1811 | M | M.Csp16192ORF275P (94% identity) | M.Csp16187ORF1811P | |
| 1812 | S-ribosylhomocysteine lyase | |||
| plasmid p16187MP1 | ||||
| 20 | 134 aa hypothetical protein | |||
| 21 | M | M.AspE39ORF8980P (45% identity) | M.Csp16187ORF21P | |
| 22 | 201 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 96 | putative | |||
| 97 | R | Ccu92MrrP (53% identity) | Csp16187MrrP | |
| 98 | flavin reductase (DIM6/NTAB) family protein | |||