Mycobacterium species SMC-8 |
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Putative Mycobacterium species SMC-8 RM systems
Ref: Kim,T.Y. et al. unpublished
REBASE ref # 35268
| Sequence length: | GenBank #: | |
| Chromosome: | 6,609,524 bp | CP079865 |
| plasmid pSMC-8_2: | 114,395 bp | CP079867 |
| plasmid pSMC-8_3: | 128,387 bp | CP079868 |
REBASE acronym: MspSMC8
Org_num: 61976
All begin KXD97_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17570 | 159 aa hypothetical protein | |||
| 17575 | M | M.Mspsh1ORF54710P (92% identity) | M.MspSMC8ORF17575P | |
| 17580 | S | S.DspTHPORFHP (41% identity) | S.MspSMC8ORF17575P | |
| 17585 | GIY-YIG nuclease family protein | |||
| 17590 | R | Mga6399ORF19750P (90% identity) | MspSMC8ORF17575P | |
| 17595 | response regulator | |||
| 19120 | type VI secretion system Vgr family protein | |||
| 19125 | M | M.MgoX7BORF26095P (94% identity) | M.MspSMC8ORF19125P | |
| 19130 | S | S.MgoX7BORF26095P (83% identity) | S1.MspSMC8ORF19125P | |
| 19135 | S | S1.Mph15301ORF12930P (84% identity) | S2.MspSMC8ORF19125P | |
| 19140 | R | MgoX7BORF26095P (91% identity) | MspSMC8ORF19125P | |
| 19145 | 80 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4820 | catechol 1,2-dioxygenase | |||
| 4825 | M | M.Mva95051ORF5343P (87% identity) | M.MspSMC8ORF4825P | |
| 4830 | R | Mau10437IP (80% identity) | MspSMC8ORF4825P | |
| 4835 | phosphatase PAP2 family protein | |||
| 10070 | DUF3696 domain-containing protein | |||
| 10075 | M | M.Ssp0431SspAP (69% identity) | M.MspSMC8SspAP | |
| 10080 | 469 aa hypothetical protein | |||
| plasmid pSMC-8_2 | ||||
| 31800 | DUF1173 domain-containing protein | |||
| 31805 | M | M.MspSMC4ORF26805P (100% identity) | M.MspSMC8ORF31805P | |
| 31810 | DUF2510 domain-containing protein | |||
| 31835 | 94 aa hypothetical protein | |||
| 31840 | M | M.MobUC1ORF4155P (98% identity) | M.MspSMC8ORF31840P | |
| 31845 | 182 aa hypothetical protein | |||
| plasmid pSMC-8_3 | ||||
| 32570 | IS5 family transposase | |||
| 32575 | RM | MspND915ORF11845P (89% identity) | MspSMC8ORF32575P | |
| 32580 | three-Cys-motif partner protein TcmP | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 150 | IS3-like element ISMysp3 family transposase | |||
| 155 | R | GobMrrP (48% identity) | MspSMC8MrrP | |
| 160 | GIY-YIG nuclease family protein | |||
| 12265 | 125 aa hypothetical protein | |||
| 12270 | R | Mch221ORF4280P (95% identity) | MspSMC8ORF12270P | |
| 12275 | transposase | |||