Geoalkalibacter species SAP-1 |
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Putative Geoalkalibacter species SAP-1 RM systems
Ref: Yadav,S. et al. Environ Microbiol (2022) In press
REBASE ref # 35297
Complete sequence: 4,125,959 bp
GenBank #: CP092109
REBASE acronym: GhaSAP1
Org_num: 61968
All begin L9S41_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1790 | TIGR04255 family protein | |||
| 1795 | R | Tpa21527ORF58P (59% identity) | GhaSAP1ORF1810P | |
| 1800 | DNA binding domain-containing protein | |||
| 1805 | S | S.AspTCORF1770P (44% identity) | S.GhaSAP1ORF1810P | |
| 1810 | M | M.Tpa21527ORF58P (63% identity) | M.GhaSAP1ORF1810P | |
| 1815 | DUF2892 domain-containing protein | |||
| 6775 | IS1380 family transposase | |||
| 6780 | R | DdeGORF2498P (95% identity) | GhaSAP1ORF6785P | |
| 6785 | M | M.DmuORFBP (97% identity) | M.GhaSAP1ORF6785P | |
| 6790 | S | S1.TspPSB1VIP (93% identity) | S1.GhaSAP1ORF6785P | |
| 6795 | 63 aa hypothetical protein | |||
| 6800 | S | S.NocAORF3029P (30% identity) | S2.GhaSAP1ORF6785P | |
| 6805 | 67 aa hypothetical protein | |||
| 12450 | SOS response-associated peptidase | |||
| 12455 | M | M.Ppr5001ORF614P (94% identity) | M.GhaSAP1ORF12455P | |
| 12460 | S | S1.TboBBSORF25165P (60% identity) | S1.GhaSAP1ORF12455P | |
| 12465 | S | S.Psp21044ORF6520P (55% identity) | S2.GhaSAP1ORF12455P | |
| 12470 | DNA binding domain-containing protein | |||
| 12475 | R | DdeGORF1861P (95% identity) | GhaSAP1ORF12455P | |
| 12480 | HTH domain-containing protein | |||
| 16845 | carboxypeptidase-like regulatory | |||
| 16850 | M | M.SbrRU1ORF2213P (33% identity) | M.GhaSAP1ORF16850P | |
| 16855 | AAA family ATPase | |||
| 17610 | M48 family metallopeptidase | |||
| 17615 | R | SbrRU1ORF2213P (57% identity) | GhaSAP1ORF17615P | |
| 17620 | DUF262 domain-containing HNH endonuclease family | |||
| 18945 | 94 aa hypothetical protein | |||
| 18950 | S | S1.MkoMY1ORF225P (29% identity) | S.GhaSAP1ORF18955P | |
| 18955 | M | M.FspSLB01ORF3690P (19% identity) | M.GhaSAP1ORF18955P | |
| 18960 | transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2845 | HIT family protein | |||
| 2850 | R | GhaSAP1ORF2860P (84% identity) | GhaSAP1ORF2850P | |
| 2855 | HIT family protein | |||
| 2855 | HIT family protein | |||
| 2860 | R | GhaSAP1ORF2850P (84% identity) | GhaSAP1ORF2860P | |
| 2865 | 105 aa hypothetical protein | |||
| 16070 | ISL3 family transposase | |||
| 16075 | R | TspsG1ORF1671P (57% identity) | GhaSAP1ORF16085P | |
| 16080 | V | V.TspsG1ORF1671P (55% identity) | V.GhaSAP1ORF16085P | |
| 16085 | M | M.TspsG1ORF1671P (77% identity) | M.GhaSAP1ORF16085P | |
| 16090 | DEAD/DEAH box helicase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9610 | 311 aa hypothetical protein | |||
| 9615 | R | Rsp24678ORF7981P (43% identity) | GhaSAP1ORF9620P | |
| 9620 | M | M.BteBS001ORF25538P (32% identity) | M.GhaSAP1ORF9620P | |
| 9625 | GIY-YIG nuclease family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 12475 | type I restriction endonuclease subunit R | |||
| 12480 | R | Pac3247MrrP (88% identity) | GhaSAP1MrrP | |
| 12485 | 423 aa hypothetical protein | |||