Escherichia coli THB42-F1 |
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Putative Escherichia coli THB42-F1 RM systems
Ref: Pan,Y. et al. unpublished
REBASE ref # 35189
| Sequence length: | GenBank #: | |
| Chromosome: | 4,644,470 bp | CP104326 |
| plasmid pHB42-F1: | 162,761 bp | CP104327 |
REBASE acronym: EcoF1
Org_num: 61791
All begin N0470_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1660 | cell division protein DamX | |||
| 1665 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoF1DamP |
| 1670 | ribulose-phosphate 3-epimerase | |||
| 2290 | DUF2556 family protein | |||
| 2295 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.EcoF1ORF2295P |
| 2300 | DNA-binding transcriptional regulator Fis | |||
| 8825 | phosphohydrolase | |||
| 8830 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoF1DcmP |
| 8835 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.EcoF1DcmP |
| 8840 | drug/metabolite exporter YedA | |||
| plasmid pHB42-F1 | ||||
| 23165 | 97 aa hypothetical protein | |||
| 23170 | M | M.Xca80ORFEP (100% identity) | M.EcoF1ORF23170P | |
| 23175 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13040 | isocitrate/isopropylmalate family dehydrogenase | |||
| 13045 | R | SsoSE61ORF22640P (100% identity) | YCGR | EcoF1ORF13045P |
| 13050 | site-specific DNA recombinase | |||
| 19245 | GTPase | |||
| 19250 | R | SenHNK130MrrP (100% identity) | EcoF1MrrP | |
| 19255 | type I restriction-modification system | |||
| 19270 | endoribonuclease SymE | |||
| 19275 | R | EcoVir2McrBP (100% identity) | EcoF1McrBP | |
| 19280 | R | SenHNK130McrCP (100% identity) | EcoF1McrCP | |
| 19285 | 978 aa hypothetical protein | |||