Lacticaseibacillus paracasei VHProbi O44 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Lacticaseibacillus paracasei VHProbi O44 RM systems
Ref: Cui,H. unpublished
REBASE ref # 30852
| Sequence length: | GenBank #: | |
| Chromosome: | 3,105,961 bp | CP104303 |
| plasmid pBO44: | 68,258 bp | CP104305 |
| plasmid pCO44: | 64,133 bp | CP104306 |
REBASE acronym: Lpa044
Org_num: 61798
All begin N4T21_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11115 | DUF262 domain-containing HNH endonuclease family | |||
| 11120 | S | S1.Lpa8700ORF2016P (65% identity) | S2.Lpa044ORF11135P | |
| 11125 | site-specific integrase | |||
| 11130 | S | S2.LpaALAC4ORF866P (59% identity) | S1.Lpa044ORF11135P | |
| 11135 | M | M.LpaP4AORF11180P (100% identity) | M.Lpa044ORF11135P | |
| 11140 | R | LpaALAC4ORF866P (100% identity) | Lpa044ORF11135P | |
| 11145 | 202 aa hypothetical protein | |||
| plasmid pBO44 | ||||
| 15860 | recombinase family protein | |||
| 15865 | R | OoeSD2aORF1450P (80% identity) | Lpa044ORF15875P | |
| 15870 | S | S1.LpaNJ2ORF11150P (49% identity) | S.Lpa044ORF15875P | |
| 15875 | M | M.Lsu3634ORF4445P (79% identity) | M.Lpa044ORF15875P | |
| 15880 | 180 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10375 | IS30 family transposase | |||
| 10380 | M | M.LpaXI3ORFCP (98% identity) | GTCGAC | M.Lpa044ORF10380P |
| 10385 | AAA family ATPase | |||
| 10470 | DEAD/DEAH box helicase | |||
| 10475 | RM | LfeA51ORF10070P (99% identity) | Lpa044ORF10475P | |
| 10480 | 261 aa hypothetical protein | |||
| plasmid pCO44 | ||||
| 15980 | IS5 family transposase | |||
| 15985 | R | Lbr124ORFBP (81% identity) | Lpa044ORF15990P | |
| 15990 | M | M.Lbr124ORFBP (87% identity) | M.Lpa044ORF15990P | |
| 15995 | glutaredoxin family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11110 | 272 aa hypothetical protein | |||
| 11115 | R | Lpa8700GmrSDP (100% identity) | Lpa044GmrSDP | |
| 11120 | restriction endonuclease subunit S | |||