Escherichia coli IPCEC48 |
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Putative Escherichia coli IPCEC48 RM systems
Ref: Suzuki,M. et al. unpublished
REBASE ref # 35190
| Sequence length: | GenBank #: | |
| Chromosome: | 5,198,889 bp | AP026794 |
| plasmid pIPCEC48_1: | 165,477 bp | AP026795 |
REBASE acronym: EcoCEC48
Org_num: 61549
All begin IPCEC48_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 850 | 184 aa hypothetical protein | |||
| 860 | R | EcoCEC42ORF850P (100% identity) | ACYNNNNNNGTTC | EcoCEC48ORF880P |
| 870 | S | S.Ecos53ORF20340P (100% identity) | ACYNNNNNNGTTC | S.EcoCEC48ORF880P |
| 880 | M | M.SenS0935ORF770P (99% identity) | ACYNNNNNNGTTC | M.EcoCEC48ORF880P |
| 890 | 168 aa hypothetical protein | |||
| 37180 | 260 aa hypothetical protein | |||
| 37190 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoCEC48ORF37200P |
| 37200 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoCEC48ORF37200P |
| 37210 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoCEC48ORF37200P |
| 37220 | 52 aa hypothetical protein | |||
| 40650 | 388 aa hypothetical protein | |||
| 40660 | M | M.EcosS9ORF3165P (100% identity) | RTACNNNNGTG | M.EcoCEC48ORF40660P |
| 40670 | S | S.EcosS9ORF3165P (100% identity) | RTACNNNNGTG | S.EcoCEC48ORF40660P |
| 40680 | R | EcosS9ORF3165P (100% identity) | RTACNNNNGTG | EcoCEC48ORF40660P |
| 40690 | endoribonuclease SymE | |||
| 45030 | transposase | |||
| 45040 | R | EcotcmA3ORF16550P (100% identity) | EcoCEC48ORF45080P | |
| 45050 | 462 aa hypothetical protein | |||
| 45060 | ATP-dependent DNA helicase RecQ | |||
| 45070 | S | S.EcotcmA3ORF16550P (100% identity) | S.EcoCEC48ORF45080P | |
| 45080 | M | M.Pre393ORF2750P (100% identity) | M.EcoCEC48ORF45080P | |
| 45090 | 74 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3870 | cell division protein DamX | |||
| ??? | M | M.SspPIBDamP (100% identity) | GATC | M.EcoCEC48DamP |
| 3890 | ribulose-phosphate 3-epimerase | |||
| 4990 | acrEF/envCD operon transcriptional regulator | |||
| 5000 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoCEC48ORF5000P |
| 5010 | DNA-binding protein Fis | |||
| 19340 | phosphohydrolase | |||
| 19350 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoCEC48DcmP |
| 19360 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoCEC48DcmP |
| 19370 | inner membrane transporter YedA | |||
| 26060 | anti-adapter protein IraM | |||
| 26070 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoCEC48ORF26070P |
| 26080 | 65 aa hypothetical protein | |||
| 30500 | 118 aa hypothetical protein | |||
| 30510 | M | M.KpnYN1ORFGP (89% identity) | M.EcoCEC48ORF30510P | |
| 30520 | 71 aa hypothetical protein | |||
| plasmid pIPCEC48_1 | ||||
| 49540 | 73 aa hypothetical protein | |||
| 49550 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoCEC48ORF49550P |
| 49560 | 308 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 40640 | membrane protein | |||
| 40650 | R | EcosS9MrrP (100% identity) | EcoCEC48MrrP | |
| 40660 | DNA methyltransferase | |||
| 41300 | 84 aa hypothetical protein | |||
| 41310 | R | EcosS3McrBP (100% identity) | EcoCEC48McrBP | |
| 41320 | R | EcosS9McrCP (100% identity) | EcoCEC48McrCP | |
| 41330 | 579 aa hypothetical protein | |||