Arthrospira platensis C1 |
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Putative Arthrospira platensis C1 RM systems
Ref: Prommeenate,P. et al. unpublished
REBASE ref # 35173
Complete sequence: 6,400,479 bp
GenBank #: CP019998
REBASE acronym: AplC1
Org_num: 10227
All begin APLC1_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 653 | anthranilate phosphoribosyltransferase | |||
| 654 | R | AplC1ORF203850P (100% identity) | AplC1ORF658P | |
| 655 | TIGR02646 family protein | |||
| 656 | ATP-binding protein involved in | |||
| 657 | S | S.AplC1ORF203850P (100% identity) | S.AplC1ORF658P | |
| 658 | M | M.AplC1ORF203850P (61% identity) | M.AplC1ORF658BP | |
| 659 | M | M.LfuKN01ORF26025P (33% identity) | M.AplC1ORF658AP | |
| 660 | S-layer homology domain-containing protein | |||
| 685 | chromosomal replication initiator protein DnaA | |||
| 686 | R | AmaCSORF788P (99% identity) | AplC1ORF204170P | |
| 687 | S | S.AmeWSORF2351P (34% identity) | S.AplC1ORF204170P | |
| 688 | RNA binding protein YcfA, dsRBD-like | |||
| 689 | 72 aa hypothetical protein | |||
| 690 | M | M.LfuKN01ORF26170P (99% identity) | M.AplC1ORF204170P | |
| 691 | Protein of unknown function (DUF433) | |||
| 1496 | antitoxin MazE | |||
| 1497 | M | M.Asp92ORFI1P (100% identity) | M.AplC1ORF1497P | |
| 1498 | nuclease of restriction | |||
| 1497 | type I restriction enzyme M protein | |||
| 1498 | S | S1.Lfu8579ORF3950P (68% identity) | S1.AplC1ORF1498P | |
| 1499 | S | S.LfuKN01ORF3470P (27% identity) | S2.AplC1ORF1498P | |
| 1500 | S | S2.Asp92ORFI1P (97% identity) | S3.AplC1ORF1498P | |
| 1501 | addiction module antidote protein, HigA family | |||
| 1502 | R | AplC1ORF260040P (100% identity) | AplC1ORF1498P | |
| 1503 | 96 aa hypothetical protein | |||
| 3418 | 242 aa hypothetical protein | |||
| ??? | R | AplDDORFCP (100% identity) | AplC1ORF531840P | |
| 3423 | Transcriptional regulator, AbiEi antitoxin, Type | |||
| 3589 | 83 aa hypothetical protein | |||
| 3590 | R | AplC1ORF540080P (100% identity) | AplC1ORF3590P | |
| 3591 | protein of unknown function (DUF4926) | |||
| 3592 | 110 aa hypothetical protein | |||
| 3593 | S | S.AplC1ORF540080P (100% identity) | S.AplC1ORF3590P | |
| 3594 | 33 aa hypothetical protein | |||
| 3595 | nucleic acid-binding protein, contains | |||
| 3596 | 83 aa hypothetical protein | |||
| 3597 | nuclease, contains PIN domain, | |||
| 3598 | Uncharacterized conserved protein, DUF433 | |||
| 3599 | 43 aa hypothetical protein | |||
| 3600 | PIN domain-containing protein | |||
| 3601 | transposase | |||
| 3602 | 127 aa hypothetical protein | |||
| 3603 | 105 aa hypothetical protein | |||
| 3604 | 83 aa hypothetical protein | |||
| 3605 | M | M.AplC1ORF540220P (100% identity) | M.AplC1ORF3590P | |
| 3606 | 123 aa hypothetical protein | |||
| 5325 | 51 aa hypothetical protein | |||
| 5326 | R | LinBM01ORF5200P (100% identity) | AplC1ORF51010P | |
| 5327 | 215 aa hypothetical protein | |||
| 5328 | M | M.LinBM01ORF5200P (99% identity) | M.AplC1ORF51010P | |
| 5329 | 101 aa hypothetical protein | |||
| 5330 | 44 aa hypothetical protein | |||
| 5331 | 80 aa hypothetical protein | |||
| 5332 | 157 aa hypothetical protein | |||
| 5333 | nucleic acid-binding protein, contains | |||
| 5334 | 46 aa hypothetical protein | |||
| 5335 | S | S.Asp92ORFZP (62% identity) | S.AplC1ORF51010P | |
| 5336 | 91 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 337 | DNA replication and repair protein RecO | |||
| 338 | R | LfuKN01ORF24650P (100% identity) | GRCGYC | AplC1ORF200600P |
| 339 | M | M.AmaCSORF5018P (100% identity) | GRCGYC | M.AplC1ORF200600P |
| 340 | Anti-sigma regulatory factor (Ser/Thr protein | |||
| 598 | REP element-mobilizing transposase RayT | |||
| ??? | RM | AplYZORF2575P (92% identity) | AplC1ORF599P | |
| 601 | 143 aa hypothetical protein | |||
| 786 | chemotaxis protein CheC | |||
| 787 | M | M.LinBM01ORF24775P (100% identity) | CYCGRG | M.AplC1ORF787P |
| 788 | R | LinBM01ORF24775P (39% identity) | CYCGRG | AplC1ORF787AP |
| 789 | R | LinBM01ORF24775P (60% identity) | CYCGRG | AplC1ORF787BP |
| 790 | cytochrome c-type biogenesis protein | |||
| 940 | 82 aa hypothetical protein | |||
| ??? | M | M.LfuKN01ORF950P (82% identity) | M.AplC1ORF941P | |
| 942 | R | LfuKN01ORF950P (100% identity) | RCATGY | AplC1ORF941P |
| 943 | C | C.Asp92ORFCP (100% identity) | C.AplC1ORF941P | |
| 944 | 77 aa hypothetical protein | |||
| 1150 | 228 aa hypothetical protein | |||
| 1151 | RM | LinBM01ORF23735P (94% identity) | AplC1ORF1151P | |
| 1152 | 171 aa hypothetical protein | |||
| 1179 | 265 aa hypothetical protein | |||
| 1180 | M | M.Lfu8579ORF2325P (100% identity) | CTGCAG | M.AplC1ORF208990P |
| 1181 | UDP-N-acetylglucosamine 2-epimerase | |||
| 1553 | bifunctional UDP-N-acetylglucosamine | |||
| 1554 | R | LfuKN01ORF3670P (100% identity) | CATATG | AplC1ORF1555P |
| 1555 | M | M.Lfu8579ORF4165P (100% identity) | M.AplC1ORF1555P | |
| 1556 | membrane protein | |||
| 1691 | Uncharacterized conserved protein YbjT, contains | |||
| 1692 | M | M.LfuKN01ORF3340P (100% identity) | CAGCTG | M.AplC1ORF271110P |
| 1693 | C | C.Lfu8579ORF4815P (100% identity) | C.AplC1ORF271110P | |
| 1694 | R | LfuKN01ORF3340P (100% identity) | CAGCTG | AplC1ORF271110P |
| 1695 | 55 aa hypothetical protein | |||
| 2107 | Pimeloyl-ACP methyl ester carboxylesterase | |||
| 2108 | R | AplDDORFJP (98% identity) | AplC1ORF2110P | |
| 2109 | 137 aa hypothetical protein | |||
| 2110 | M | M.AplC1ORF361080P (32% identity) | M.AplC1ORF2110AP | |
| 2111 | M | M.AplC1ORF361080P (59% identity) | M.AplC1ORF2110BP | |
| 2112 | 1123 aa hypothetical protein | |||
| 2157 | restriction system protein | |||
| 2158 | M | M.Asp92ORFF1P (100% identity) | GACNNNGTC | M.AplC1ORF2158P |
| 2159 | R | LfuKN01ORF5980P (100% identity) | GACNNNGTC | AplC1ORF2158P |
| 2160 | C | C.LfuKN01ORF5980P (100% identity) | C.AplC1ORF2158P | |
| 2161 | Protein of unknown function (DUF1092) | |||
| 2184 | 3-isopropylmalate dehydrogenase | |||
| 2185 | M | M.AplC1ORF370460P (100% identity) | TCTAGA | M.AplC1ORF2185P |
| 2186 | 83 aa hypothetical protein | |||
| 2187 | NB-ARC domain-containing protein | |||
| 2188 | R | AplDDORFHP (99% identity) | AplC1ORF2185P | |
| 2189 | ferredoxin | |||
| 2286 | nanoRNase/pAp phosphatase, hydrolyzes c-di-AMP | |||
| 2287 | C | C.LfuKN01ORF6475P (100% identity) | C.AplC1ORFAP | |
| ??? | R | LfuKN01ORF6475P (100% identity) | TACGTA | AplC1ORFAP |
| ??? | M | M.LfuKN01ORF6475P (100% identity) | TACGTA | M.AplC1ORFAP |
| 2292 | 16S rRNA methyltransferase RsmF | |||
| 2512 | cobalamin biosynthesis protein CobW | |||
| 2513 | R | LinBM01ORF17350P (100% identity) | GGYRCC | AplC1ORF2514P |
| 2514 | M | M.LfuKN01ORF7320P (61% identity) | M.AplC1ORF2514AP | |
| 2515 | M | M.LinBM01ORF17350P (37% identity) | M.AplC1ORF2514BP | |
| 2516 | 290 aa hypothetical protein | |||
| 2868 | CHAT domain-containing protein | |||
| 2869 | M | M.Asp92ORFIP (100% identity) | M.AplC1ORF500400P | |
| 2870 | 219 aa hypothetical protein | |||
| 2909 | ADP-ribosylglycohydrolase | |||
| 2910 | M | M.LinBM01ORF15660P (100% identity) | TCTAGA | M.AplC1ORF500890P |
| 2911 | succinate dehydrogenase / fumarate reductase | |||
| 3000 | Protein of unknown function (DUF2281) | |||
| 3001 | RM | LinBM01ORF15225P (76% identity) | AplC1ORF3001P | |
| 3002 | Very-short-patch-repair endonuclease | |||
| 3527 | ABC transport system permease protein | |||
| 3528 | R | AplDDORFBP (100% identity) | AplC1ORF3528P | |
| 3529 | ATPase | |||
| 3691 | S-(hydroxymethyl)glutathione dehydrogenase / | |||
| 3692 | M | M.LinBM01ORF12155P (92% identity) | M.AplC1ORF3692P | |
| 3693 | MFS transporter, AGZA family, | |||
| 4037 | glutathione S-transferase | |||
| 4038 | M | M.LinBM01ORF10715P (100% identity) | GGTNACC | M.AplC1ORF550980P |
| 4039 | R | LinBM01ORF10715P (100% identity) | GGTNACC | AplC1ORF550980P |
| 4040 | transposase | |||
| 4314 | allophycocyanin beta-18 subunit apoprotein | |||
| 4315 | M | M.LfuKN01ORF14555P (16% identity) | M.AplC1ORF4315AP | |
| 4316 | M | M.LfuKN01ORF14555P (69% identity) | M.AplC1ORF4315BP | |
| 4317 | 23S rRNA (cytidine1920-2-O)/16S rRNA | |||
| 4458 | 3-oxoacyl-[acyl-carrier-protein] synthase II | |||
| 4459 | M | M.LinBM01ORF8860P (100% identity) | GCSGC | M.AplC1ORF10970P |
| 4461 | RIP metalloprotease RseP | |||
| 5267 | NB-ARC domain-containing protein | |||
| 5268 | R | Asp92ORFPP (100% identity) | AplC1ORF50280P | |
| 5269 | M | M.LfuKN01ORF24245P (100% identity) | M.AplC1ORF50280P | |
| 5270 | WD domain-containing protein, G-beta | |||
| 5314 | integron integrase | |||
| 5315 | M | M.Lfu8579ORF21805P (100% identity) | CGTACG | M.AplC1ORF5315P |
| 5316 | R | LinBM01ORF5260P (100% identity) | CGTACG | AplC1ORF5315P |
| 5317 | 47 aa hypothetical protein | |||
| 5579 | 395 aa hypothetical protein | |||
| 5580 | RM | Psp001ORF27065P (85% identity) | TTCGAA | AplC1ORF61590P |
| 5581 | protein of unknown function (DUF4388) | |||
| 5613 | FAD dependent oxidoreductase | |||
| 5614 | R | AplC1ORF80070P (100% identity) | GCTAGC | AplC1ORF5615P |
| 5615 | M | M.LfuKN01ORF19175P (76% identity) | M.AplC1ORF5615P | |
| 5616 | UbiA prenyltransferase family protein | |||
| 6102 | L-cysteine/cystine lyase | |||
| ??? | M | M.SplZORFRP (98% identity) | M.AplC1ORF6103P | |
| 6104 | 232 aa hypothetical protein | |||
| 6103 | site-specific DNA-methyltransferase | |||
| ??? | R | SplZORFRP (100% identity) | ATGCAT | AplC1ORF101350P |
| 6106 | phosphoribosyltransferase | |||
| 6252 | 65 aa hypothetical protein | |||
| 6253 | R | LinBM01ORF1220P (91% identity) | TTCGAA | AplC1ORF102600P |
| 6254 | M | M.LfuKN01ORF21740P (100% identity) | TTCGAA | M.AplC1ORF102600P |
| 6255 | Protein of function (DUF2518) | |||
| 6453 | asparagine synthase (glutamine-hydrolyzing) | |||
| 6454 | M | M.LfuKN01DndDP (99% identity) | M.AplC1DndDP | |
| 6455 | DNA sulfur modification protein DndC | |||
| 6454 | DNA sulfur modification protein DndD | |||
| 6455 | M | M.AplDDDndCP (100% identity) | M.AplC1DndCP | |
| 6456 | DGQHR domain-containing protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4821 | 167 aa hypothetical protein | |||
| 4822 | M | M.Asp92ORFA1P (85% identity) | M.AplC1ORF32000P | |
| 4823 | ATPase/GTPase, AAA15 family | |||
| 4824 | 47 aa hypothetical protein | |||
| 4825 | 143 aa hypothetical protein | |||
| 4826 | R | LinBM01ORF7435P (99% identity) | AplC1ORF32000P | |
| 4827 | Glycosyltransferase involved in cell wall | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1624 | 119 aa hypothetical protein | |||
| 1625 | R | SraDG5AMrrP (68% identity) | AplC1MrrP | |
| 1626 | DnaJ domain-containing protein | |||
| 2156 | 40 aa hypothetical protein | |||
| 2157 | R | Asp8005MrrP (99% identity) | AplC1Mrr2P | |
| 2158 | DNA methylase | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1205 | S-adenosylmethionine decarboxylase | |||
| 1206 | M | M.LfuKN01ORF2050P (100% identity) | GATC | M.AplC1ORF220200P |
| 1207 | 46 aa hypothetical protein | |||