Neisseria gonorrhoeae 9126 |
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Putative Neisseria gonorrhoeae 9126 RM systems
Ref: Shaskolskiy,B. and Kandinov,I. unpublished
REBASE ref # 35250
Complete sequence: 2,220,893 bp
GenBank #: CP098546
REBASE acronym: Ngo9126
Org_num: 61766
All begin NDQ67_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2050 | ADP-glyceromanno-heptose 6-epimerase | |||
| 2055 | M | M.NgoFA19ORF148P (100% identity) | M.Ngo9126ORF2055P | |
| 2060 | DNA damage-inducible protein D | |||
| 2065 | S | S.NgoWMII (50% identity) | GCANNNNNNNNTGC | S1.Ngo9126ORF2055P |
| 2070 | S | S2.NgoN160ORF2075P (100% identity) | GCANNNNNNNNTGC | S2.Ngo9126ORF2055P |
| 2075 | R | Ngo9399ORF2075P (100% identity) | Ngo9126ORF2055P | |
| 2080 | ATP-dependent Clp protease ATP-binding subunit | |||
| 3515 | replication-associated recombination protein A | |||
| 3520 | R | NgoPID1ORF461P (99% identity) | GAGNNNNNTAC | Ngo9126ORF3545P |
| 3525 | hydroxyacid dehydrogenase | |||
| 3530 | S | S.Ngos1291I (100% identity) | GAGNNNNNTAC | S.Ngo9126ORF3545P |
| 3535 | 186 aa hypothetical protein | |||
| 3540 | 280 aa hypothetical protein | |||
| 3545 | M | M.NgoPID1ORF461P (100% identity) | GAGNNNNNTAC | M.Ngo9126ORF3545P |
| 3550 | ABC transporter | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 30 | leucine--tRNA ligase | |||
| 35 | R | Ngos1291ORF5750P (100% identity) | GATC | Ngo9126ORF40P |
| ??? | M | M.NgoWSORF8P (100% identity) | GATC | M.Ngo9126ORF40P |
| 45 | 184 aa hypothetical protein | |||
| 1525 | phenylalanine--tRNA ligase subunit alpha | |||
| 1530 | V | V.NgoWSORF391P (100% identity) | V.Ngo9126ORF1535P | |
| ??? | M | M.NgoWSORF391P (100% identity) | CCGG | M.Ngo9126ORF1535P |
| 1545 | R | Ngo9399ORF1545P (100% identity) | CCGG | Ngo9126ORF1535P |
| 1550 | phenylalanine--tRNA ligase subunit beta | |||
| 1820 | N-6 DNA methylase | |||
| 1825 | S | S.NgoFA19ORF100P (100% identity) | GACNNNNNTGA | S.Ngo9126ORF1825P |
| 1830 | 140 aa hypothetical protein | |||
| 1850 | uroporphyrinogen decarboxylase | |||
| 1855 | H | H.Ngos1291ORF7560P (100% identity) | H.Ngo9126ORF1865P | |
| 1860 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo9126ORF1865P |
| 1865 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo9126ORF1865P |
| 1870 | DNA repair protein RadA | |||
| 3405 | 3-isopropylmalate dehydrogenase | |||
| 3410 | R | Ngos1291ORF9120P (100% identity) | GGNNCC | Ngo9126ORF3415P |
| 3415 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo9126ORF3415P |
| 3420 | 3-isopropylmalate dehydratase small subunit | |||
| 4715 | anthranilate synthase component I | |||
| 4720 | M | M.NgoWLORF1156P (100% identity) | GCCGGC | M.Ngo9126ORF4720P |
| 4725 | R | NgoFQ01ORF4235P (99% identity) | GCCGGC | Ngo9126ORF4720P |
| 4730 | 5-(carboxyamino)imidazole ribonucleotide | |||
| 6085 | replication initiation factor domain-containing | |||
| 6090 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo9126ORF6105P | |
| ??? | R | NgoWSORF1801P (100% identity) | CCGG | Ngo9126ORF6105P |
| ??? | M | M.NgoSH240ORFLP (100% identity) | CCGG | M.Ngo9126ORF6105P |
| 6115 | 48 aa hypothetical protein | |||
| 10095 | IS5/IS1182 family transposase | |||
| 10100 | R | NgoWSIIIP (100% identity) | GGTGA | Ngo9126ORF10105P |
| 10105 | M | M1.NgoFA19I (100% identity) | GGTGA | M1.Ngo9126ORF10105P |
| 10110 | M | M1.NgoWSIII (100% identity) | GGTGA | M2.Ngo9126ORF10105P |
| 10115 | RNA-binding transcriptional accessory protein | |||
| 10630 | GTPase ObgE | |||
| 10635 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.Ngo9126ORF10635P |
| 10640 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | Ngo9126ORF10635P |
| 10645 | cysteine--tRNA ligase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2755 | peptidylprolyl isomerase | |||
| 2760 | M | M.NgoHL122ORF2795P (100% identity) | M.Ngo9126ORF2760P | |
| 2765 | R | Ngos1291ORF8455P (100% identity) | Ngo9126ORF2760P | |
| 2770 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
| 3225 | alpha-hydroxy-acid oxidizing protein | |||
| 3230 | R | NgoFA19ORF379P (100% identity) | ACACC | Ngo9126ORF3235P |
| 3235 | M | M.NgoFA19ORF379P (98% identity) | ACACC | M.Ngo9126ORF3235P |
| 3245 | tRNA pseudouridine(55) synthase TruB | |||