Neisseria gonorrhoeae 10704 |
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Putative Neisseria gonorrhoeae 10704 RM systems
Ref: Shaskolskiy,B. and Kandinov,I. unpublished
REBASE ref # 35250
Complete sequence: 2,218,708 bp
GenBank #: CP098542
REBASE acronym: Ngo10704
Org_num: 61761
All begin NDQ68_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2040 | ADP-glyceromanno-heptose 6-epimerase | |||
| 2045 | M | M.NgoFA19ORF148P (100% identity) | M.Ngo10704ORF2045P | |
| 2050 | DNA damage-inducible protein D | |||
| 2055 | S | S1.Ngo9343ORF2050P (100% identity) | GCANNNNNNNNTGC | S1.Ngo10704ORF2045P |
| 2060 | S | S2.NgoN160ORF2075P (100% identity) | GCANNNNNNNNTGC | S2.Ngo10704ORF2045P |
| 2065 | R | Ngo9399ORF2075P (100% identity) | Ngo10704ORF2045P | |
| 2070 | ATP-dependent Clp protease ATP-binding subunit | |||
| 4750 | ABC transporter | |||
| 4755 | M | M.NgoPID1ORF461P (100% identity) | GAGNNNNNTAC | M.Ngo10704ORF4755P |
| 4760 | 280 aa hypothetical protein | |||
| 4765 | 186 aa hypothetical protein | |||
| 4770 | S | S.Ngos1291I (100% identity) | GAGNNNNNTAC | S.Ngo10704ORF4755P |
| 4775 | hydroxyacid dehydrogenase | |||
| 4780 | R | NgoPID1ORF461P (99% identity) | GAGNNNNNTAC | Ngo10704ORF4755P |
| 4785 | replication-associated recombination protein A | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 30 | leucine--tRNA ligase | |||
| 35 | R | Ngos1291ORF5750P (100% identity) | GATC | Ngo10704ORF40P |
| ??? | M | M.NgoWSORF8P (100% identity) | GATC | M.Ngo10704ORF40P |
| 45 | 184 aa hypothetical protein | |||
| 1515 | phenylalanine--tRNA ligase subunit alpha | |||
| 1520 | V | V.NgoWSORF391P (100% identity) | V.Ngo10704ORF1525P | |
| ??? | M | M.NgoWSORF391P (100% identity) | CCGG | M.Ngo10704ORF1525P |
| 1535 | R | Ngo9399ORF1545P (100% identity) | CCGG | Ngo10704ORF1525P |
| 1540 | phenylalanine--tRNA ligase subunit beta | |||
| 1810 | N-6 DNA methylase | |||
| 1815 | S | S.NgoFA19ORF100P (100% identity) | GACNNNNNTGA | S.Ngo10704ORF1815P |
| 1820 | 140 aa hypothetical protein | |||
| 1840 | uroporphyrinogen decarboxylase | |||
| 1845 | H | H.Ngos1291ORF7560P (100% identity) | H.Ngo10704ORF1855P | |
| 1850 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo10704ORF1855P |
| 1855 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo10704ORF1855P |
| 1860 | DNA repair protein RadA | |||
| 3580 | 5-(carboxyamino)imidazole ribonucleotide | |||
| 3585 | R | NgoFQ01ORF4235P (100% identity) | GCCGGC | Ngo10704ORF3590P |
| 3590 | M | M.NgoWLORF1156P (100% identity) | GCCGGC | M.Ngo10704ORF3590P |
| 3595 | anthranilate synthase component I | |||
| 4875 | 3-isopropylmalate dehydratase small subunit | |||
| 4880 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo10704ORF4880P |
| 4885 | R | Ngos1291ORF9120P (100% identity) | GGNNCC | Ngo10704ORF4880P |
| 4890 | 3-isopropylmalate dehydrogenase | |||
| 7955 | replication initiation factor domain-containing | |||
| 7960 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo10704ORF7975P | |
| ??? | R | NgoWSORF1801P (100% identity) | CCGG | Ngo10704ORF7975P |
| 7975 | M | M.Nme777ORF1290P (43% identity) | M.Ngo10704ORF7975BP | |
| 7980 | M | M.NgoD159ORF475AP (89% identity) | M.Ngo10704ORF7975AP | |
| 7985 | 48 aa hypothetical protein | |||
| 9460 | FUSC family protein | |||
| ??? | R | NgoWFORF2088P (100% identity) | GGCC | Ngo10704ORF9475P |
| 9475 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.Ngo10704ORF9475P |
| 9480 | ribosome recycling factor | |||
| 10010 | IS5/IS1182 family transposase | |||
| 10015 | R | NgoWSIIIP (100% identity) | GGTGA | Ngo10704ORF10020P |
| 10020 | M | M1.NgoFA19I (100% identity) | GGTGA | M1.Ngo10704ORF10020P |
| 10025 | M | M1.NgoWSIII (100% identity) | GGTGA | M2.Ngo10704ORF10020P |
| 10030 | RNA-binding transcriptional accessory protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5055 | tRNA pseudouridine(55) synthase TruB | |||
| 5060 | M | M.Ngo9343ORF5055P (100% identity) | ACACC | M.Ngo10704ORF5060P |
| 5065 | R | NgoFA19ORF379P (100% identity) | ACACC | Ngo10704ORF5060P |
| 5070 | alpha-hydroxy-acid oxidizing protein | |||
| 5520 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
| 5525 | R | Ngo10612ORF5525P (100% identity) | Ngo10704ORF5530P | |
| 5530 | M | M.NgoHL122ORF2795P (100% identity) | M.Ngo10704ORF5530P | |
| 5535 | peptidylprolyl isomerase | |||