Neisseria gonorrhoeae 10525 |
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Putative Neisseria gonorrhoeae 10525 RM systems
Ref: Shaskolskiy,B. and Kandinov,I. unpublished
REBASE ref # 35250
Complete sequence: 2,224,751 bp
GenBank #: CP098534
REBASE acronym: Ngo10525
Org_num: 61756
All begin NDQ70_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2380 | ADP-glyceromanno-heptose 6-epimerase | |||
| 2385 | M | M.NgoSW0002ORF2090P (100% identity) | M.Ngo10525ORF2385P | |
| 2390 | DNA damage-inducible protein D | |||
| 2395 | S | S1.NgoWOORF429P (100% identity) | GCANNNNNNNNTGC | S1.Ngo10525ORF2385P |
| 2400 | S | S2.NgoN160ORF2075P (100% identity) | GCANNNNNNNNTGC | S2.Ngo10525ORF2385P |
| 2405 | R | Ngo9035ORF2405P (100% identity) | Ngo10525ORF2385P | |
| 2410 | ATP-dependent Clp protease ATP-binding subunit | |||
| 4355 | ABC transporter | |||
| 4350 | M | M.NgoWSI (100% identity) | GAGNNNNNTAC | M.Ngo10525ORF4350P |
| 4345 | 279 aa hypothetical protein | |||
| 4340 | 186 aa hypothetical protein | |||
| 4335 | S | S.NgoWSI (100% identity) | GAGNNNNNTAC | S.Ngo10525ORF4350P |
| 4330 | hydroxyacid dehydrogenase | |||
| 4325 | R | NgoWPIP (99% identity) | GAGNNNNNTAC | Ngo10525ORF4350P |
| 4320 | replication-associated recombination protein A | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 30 | leucine--tRNA ligase | |||
| 35 | R | Ngos1291ORF5750P (100% identity) | GATC | Ngo10525ORF40P |
| 40 | M | M.NgoWPORF8P (93% identity) | GATC | M.Ngo10525ORF40P |
| 45 | 184 aa hypothetical protein | |||
| 1235 | 62 aa hypothetical protein | |||
| 1240 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.Ngo10525ORF1240P |
| 1245 | R | Ngos1291ORF260P (100% identity) | CCGCGG | Ngo10525ORF1240P |
| 1250 | excinuclease ABC subunit UvrA | |||
| 1855 | phenylalanine--tRNA ligase subunit alpha | |||
| 1860 | V | V.NgoWSORF391P (100% identity) | V.Ngo10525ORF1865P | |
| ??? | M | M.NgoWSORF391P (100% identity) | CCGG | M.Ngo10525ORF1865P |
| 1875 | R | NgoWSORF391P (100% identity) | CCGG | Ngo10525ORF1865P |
| 1880 | phenylalanine--tRNA ligase subunit beta | |||
| 2150 | N-6 DNA methylase | |||
| 2155 | S | S.NgoWSORF450P (100% identity) | GACNNNNNTGA | S.Ngo10525ORF2155P |
| 2160 | 140 aa hypothetical protein | |||
| 2180 | uroporphyrinogen decarboxylase | |||
| 2185 | H | H.NgoN160ORF1885P (100% identity) | H.Ngo10525ORF2195P | |
| 2190 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo10525ORF2195P |
| 2195 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo10525ORF2195P |
| 2200 | DNA repair protein RadA | |||
| 5545 | 5-(carboxyamino)imidazole ribonucleotide | |||
| 5540 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | Ngo10525ORF5535P |
| 5535 | M | M.Ngos1291ORF10080P (100% identity) | GCCGGC | M.Ngo10525ORF5535P |
| 5530 | anthranilate synthase component I | |||
| 4220 | 3-isopropylmalate dehydratase small subunit | |||
| 4215 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo10525ORF4215P |
| 4210 | R | NgoWSORF784P (100% identity) | GGNNCC | Ngo10525ORF4215P |
| 4205 | 3-isopropylmalate dehydrogenase | |||
| 8445 | replication initiation factor domain-containing | |||
| 8450 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo10525ORF8465P | |
| ??? | R | NgoWSORF1801P (100% identity) | CCGG | Ngo10525ORF8465P |
| ??? | M | M.NgoSH240ORFLP (100% identity) | CCGG | M.Ngo10525ORF8465P |
| 8475 | 48 aa hypothetical protein | |||
| 9640 | cysteine--tRNA ligase | |||
| 9645 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | Ngo10525ORF9650P |
| 9650 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.Ngo10525ORF9650P |
| 9655 | GTPase ObgE | |||
| 10205 | RNA-binding transcriptional accessory protein | |||
| 10210 | M | M1.NgoWSIII (100% identity) | GGTGA | M1.Ngo10525ORF10210P |
| 10215 | M | M1.Ngos1291II (100% identity) | GGTGA | M2.Ngo10525ORF10210P |
| 10220 | R | NgoWSIIIP (100% identity) | GGTGA | Ngo10525ORF10210P |
| 10225 | 93 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4025 | DEAD/DEAH box helicase family protein | |||
| 4030 | M | M.Ngo10537ORF5530P (99% identity) | GCAGA | M.Ngo10525ORF4030P |
| 4035 | tRNA pseudouridine(55) synthase TruB | |||
| 4035 | tRNA pseudouridine(55) synthase TruB | |||
| ??? | M | M.Ngo10536ORF5515P (100% identity) | GCAGA | M.Ngo10525ORF11795P |
| 4025 | R | NgoNCORF1272P (100% identity) | GCAGA | Ngo10525ORF11795P |
| 4020 | alpha-hydroxy-acid oxidizing protein | |||
| 3575 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
| 3570 | R | NgoWPIIP (100% identity) | Ngo10525ORF3565P | |
| 3565 | M | M.NgoHL122ORF2795P (100% identity) | M.Ngo10525ORF3565P | |
| 3560 | peptidylprolyl isomerase | |||