Neisseria gonorrhoeae 10536 |
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Putative Neisseria gonorrhoeae 10536 RM systems
Ref: Shaskolskiy,B. and Kandinov,I. unpublished
REBASE ref # 35250
Complete sequence: 2,227,438 bp
GenBank #: CP098505
REBASE acronym: Ngo10536
Org_num: 61757
All begin NDL72_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2380 | ADP-glyceromanno-heptose 6-epimerase | |||
| 2385 | M | M.NgoSW0002ORF2090P (100% identity) | M.Ngo10536ORF2385P | |
| 2390 | DNA damage-inducible protein D | |||
| 2395 | S | S1.NgoWOORF429P (100% identity) | GCANNNNNNNNTGC | S1.Ngo10536ORF2385P |
| 2400 | S | S2.NgoN160ORF2075P (100% identity) | GCANNNNNNNNTGC | S2.Ngo10536ORF2385P |
| 2405 | R | Ngo9035ORF2405P (100% identity) | Ngo10536ORF2385P | |
| 2410 | ATP-dependent Clp protease ATP-binding subunit | |||
| 5190 | ABC transporter | |||
| 5195 | M | M.NgoWSI (100% identity) | GAGNNNNNTAC | M.Ngo10536ORF5195P |
| 5200 | 279 aa hypothetical protein | |||
| 5205 | 186 aa hypothetical protein | |||
| 5210 | S | S.NgoWSI (100% identity) | GAGNNNNNTAC | S.Ngo10536ORF5195P |
| 5215 | hydroxyacid dehydrogenase | |||
| 5220 | R | NgoWPIP (99% identity) | GAGNNNNNTAC | Ngo10536ORF5195P |
| 5225 | replication-associated recombination protein A | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 30 | leucine--tRNA ligase | |||
| 35 | R | Ngos1291ORF5750P (100% identity) | GATC | Ngo10536ORF40P |
| 40 | M | M.NgoWPORF8P (93% identity) | GATC | M.Ngo10536ORF40P |
| 45 | 184 aa hypothetical protein | |||
| 1230 | 62 aa hypothetical protein | |||
| 1235 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.Ngo10536ORF1235P |
| 1240 | R | Ngos1291ORF260P (100% identity) | CCGCGG | Ngo10536ORF1235P |
| 1245 | excinuclease ABC subunit UvrA | |||
| 1850 | phenylalanine--tRNA ligase subunit alpha | |||
| 1855 | V | V.NgoWSORF391P (100% identity) | V.Ngo10536ORF1860P | |
| ??? | M | M.NgoTFGB2ORF299P (100% identity) | CCGG | M.Ngo10536ORF1860P |
| 1870 | R | NgoWSORF391P (100% identity) | CCGG | Ngo10536ORF1860P |
| 1875 | phenylalanine--tRNA ligase subunit beta | |||
| 2150 | N-6 DNA methylase | |||
| 2155 | S | S.NgoWSORF450P (100% identity) | GACNNNNNTGA | S.Ngo10536ORF2155P |
| 2160 | 140 aa hypothetical protein | |||
| 2180 | uroporphyrinogen decarboxylase | |||
| 2185 | H | H.NgoN160ORF1885P (100% identity) | H.Ngo10536ORF2195P | |
| 2190 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo10536ORF2195P |
| 2195 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo10536ORF2195P |
| 2200 | DNA repair protein RadA | |||
| 3990 | 5-(carboxyamino)imidazole ribonucleotide | |||
| 3995 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | Ngo10536ORF4000P |
| 4000 | M | M.Ngos1291ORF10080P (100% identity) | GCCGGC | M.Ngo10536ORF4000P |
| 4005 | anthranilate synthase component I | |||
| 5325 | 3-isopropylmalate dehydratase small subunit | |||
| 5330 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo10536ORF5330P |
| 5335 | R | NgoWSORF784P (100% identity) | GGNNCC | Ngo10536ORF5330P |
| 5340 | 3-isopropylmalate dehydrogenase | |||
| 8615 | replication initiation factor domain-containing | |||
| 8620 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo10536ORF8635P | |
| ??? | R | NgoWSORF1801P (100% identity) | CCGG | Ngo10536ORF8635P |
| ??? | M | M.NgoSH240ORFLP (100% identity) | CCGG | M.Ngo10536ORF8635P |
| 8645 | 48 aa hypothetical protein | |||
| 9835 | cysteine--tRNA ligase | |||
| 9840 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | Ngo10536ORF9845P |
| 9845 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.Ngo10536ORF9845P |
| 9850 | GTPase ObgE | |||
| 10365 | RNA-binding transcriptional accessory protein | |||
| 10370 | M | M1.NgoWSIII (100% identity) | GGTGA | M1.Ngo10536ORF10370P |
| 10375 | M | M1.Ngos1291II (100% identity) | GGTGA | M2.Ngo10536ORF10370P |
| 10380 | R | NgoWSIIIP (100% identity) | GGTGA | Ngo10536ORF10370P |
| 10385 | 93 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5510 | tRNA pseudouridine(55) synthase TruB | |||
| ??? | M | M.Ngo10525ORF11795P (100% identity) | M.Ngo10536ORF5515P | |
| 5530 | R | NgoNCORF1272P (100% identity) | Ngo10536ORF5515P | |
| 5535 | alpha-hydroxy-acid oxidizing protein | |||
| 5980 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
| 5985 | R | NgoWPIIP (100% identity) | Ngo10536ORF5990P | |
| 5990 | M | M.NgoHL122ORF2795P (100% identity) | M.Ngo10536ORF5990P | |
| 5995 | peptidylprolyl isomerase | |||