Neisseria gonorrhoeae 10268 |
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Putative Neisseria gonorrhoeae 10268 RM systems
Ref: Shaskolskiy,B. and Kandinov,I. unpublished
REBASE ref # 35250
Complete sequence: 2,210,573 bp
GenBank #: CP098503
REBASE acronym: Ngo10268
Org_num: 61752
All begin NDL73_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3580 | ABC transporter | |||
| 3575 | M | M.NgoPID1ORF461P (100% identity) | GAGNNNNNTAC | M.Ngo10268ORF3575P |
| 3570 | 280 aa hypothetical protein | |||
| 3565 | 186 aa hypothetical protein | |||
| 3560 | S | S.Ngos1291I (100% identity) | GAGNNNNNTAC | S.Ngo10268ORF3575P |
| 3555 | hydroxyacid dehydrogenase | |||
| 3550 | R | NgoPID1ORF461P (99% identity) | GAGNNNNNTAC | Ngo10268ORF3575P |
| 3545 | replication-associated recombination protein A | |||
| 2055 | ADP-glyceromanno-heptose 6-epimerase | |||
| 2060 | M | M.NgoFA19ORF148P (100% identity) | M.Ngo10268ORF2060P | |
| 2065 | DNA damage-inducible protein D | |||
| 2070 | S | S1.NgoWSII (100% identity) | GCANNNNNNNNTGC | S1.Ngo10268ORF2060P |
| 2075 | S | S2.NgoN160ORF2075P (100% identity) | GCANNNNNNNNTGC | S2.Ngo10268ORF2060P |
| 2080 | R | Ngo9399ORF2075P (100% identity) | Ngo10268ORF2060P | |
| 2085 | ATP-dependent Clp protease ATP-binding subunit | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4740 | 5-(carboxyamino)imidazole ribonucleotide | |||
| 4735 | R | NgoFQ01ORF4235P (100% identity) | GCCGGC | Ngo10268ORF4730P |
| 4730 | M | M.NgoWLORF1156P (100% identity) | GCCGGC | M.Ngo10268ORF4730P |
| 4725 | anthranilate synthase component I | |||
| 3455 | 3-isopropylmalate dehydratase small subunit | |||
| 3450 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo10268ORF3450P |
| 3445 | R | Ngos1291ORF9120P (100% identity) | GGNNCC | Ngo10268ORF3450P |
| 3440 | 3-isopropylmalate dehydrogenase | |||
| 6035 | replication initiation factor domain-containing | |||
| 6040 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo10268ORF6055P | |
| ??? | R | NgoWSORF1801P (100% identity) | CCGG | Ngo10268ORF6055P |
| ??? | M | M.NgoSH240ORFLP (100% identity) | CCGG | M.Ngo10268ORF6055P |
| 6065 | 48 aa hypothetical protein | |||
| 9515 | FUSC family protein | |||
| ??? | R | NgoWFORF2088P (100% identity) | GGCC | Ngo10268ORF9530P |
| 9530 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.Ngo10268ORF9530P |
| 9535 | ribosome recycling factor | |||
| 10050 | IS5/IS1182 family transposase | |||
| 10055 | R | NgoWSIIIP (100% identity) | GGTGA | Ngo10268ORF10060P |
| 10060 | M | M1.NgoFA19I (100% identity) | GGTGA | M1.Ngo10268ORF10060P |
| 10065 | M | M1.NgoWSIII (100% identity) | GGTGA | M2.Ngo10268ORF10060P |
| 10070 | RNA-binding transcriptional accessory protein | |||
| 30 | leucine--tRNA ligase | |||
| 35 | R | Ngos1291ORF5750P (100% identity) | GATC | Ngo10268ORF40P |
| ??? | M | M.NgoWSORF8P (100% identity) | GATC | M.Ngo10268ORF40P |
| 45 | 184 aa hypothetical protein | |||
| 1530 | phenylalanine--tRNA ligase subunit alpha | |||
| 1535 | V | V.NgoWSORF391P (100% identity) | V.Ngo10268ORF1540P | |
| ??? | M | M.NgoWSORF391P (100% identity) | CCGG | M.Ngo10268ORF1540P |
| 1550 | R | Ngo9399ORF1545P (100% identity) | CCGG | Ngo10268ORF1540P |
| 1555 | phenylalanine--tRNA ligase subunit beta | |||
| 1825 | N-6 DNA methylase | |||
| 1830 | S | S.NgoFA19ORF100P (100% identity) | GACNNNNNTGA | S.Ngo10268ORF1830P |
| 1835 | 140 aa hypothetical protein | |||
| 1855 | uroporphyrinogen decarboxylase | |||
| 1860 | H | H.Ngos1291ORF7560P (100% identity) | H.Ngo10268ORF1870P | |
| 1865 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo10268ORF1870P |
| 1870 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo10268ORF1870P |
| 1875 | DNA repair protein RadA | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3275 | tRNA pseudouridine(55) synthase TruB | |||
| 3270 | M | M.Ngo10771ORF3245AP (100% identity) | M.Ngo10268ORF3265AP | |
| 3265 | M | M.Ngo9126ORF3235BP (100% identity) | M.Ngo10268ORF3265BP | |
| 3260 | R | NgoFA19ORF379P (100% identity) | Ngo10268ORF3265P | |
| 3255 | alpha-hydroxy-acid oxidizing protein | |||
| 2805 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
| 2800 | R | Ngos1291ORF8455P (100% identity) | Ngo10268ORF2795P | |
| 2795 | M | M.NgoHL122ORF2795P (100% identity) | M.Ngo10268ORF2795P | |
| 2790 | peptidylprolyl isomerase | |||