Neisseria gonorrhoeae 10328 |
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Putative Neisseria gonorrhoeae 10328 RM systems
Ref: Shaskolskiy,B. and Kandinov,I. unpublished
REBASE ref # 35250
Complete sequence: 2,213,728 bp
GenBank #: CP098468
REBASE acronym: Ngo10328
Org_num: 61755
All begin NC853_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2050 | ADP-glyceromanno-heptose 6-epimerase | |||
| 2055 | M | M.NgoFA19ORF148P (100% identity) | M.Ngo10328ORF2055P | |
| 2060 | DNA damage-inducible protein D | |||
| 2065 | S | S1.Ngo9343ORF2050P (100% identity) | GCANNNNNNNNTGC | S1.Ngo10328ORF2055P |
| 2070 | S | S2.NgoN160ORF2075P (100% identity) | GCANNNNNNNNTGC | S2.Ngo10328ORF2055P |
| 2075 | R | Ngo9399ORF2075P (100% identity) | Ngo10328ORF2055P | |
| 2080 | ATP-dependent Clp protease ATP-binding subunit | |||
| 3525 | replication-associated recombination protein A | |||
| 3530 | R | NgoPID1ORF461P (99% identity) | GAGNNNNNTAC | Ngo10328ORF3555P |
| 3535 | hydroxyacid dehydrogenase | |||
| 3540 | S | S.Ngo10814ORF3580P (100% identity) | GAGNNNNNTAC | S.Ngo10328ORF3555P |
| 3545 | 186 aa hypothetical protein | |||
| 3550 | 280 aa hypothetical protein | |||
| 3555 | M | M.NgoPID1ORF461P (100% identity) | GAGNNNNNTAC | M.Ngo10328ORF3555P |
| 3560 | ABC transporter | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 30 | leucine--tRNA ligase | |||
| 35 | R | Ngos1291ORF5750P (100% identity) | GATC | Ngo10328ORF40P |
| ??? | M | M.NgoWSORF8P (100% identity) | GATC | M.Ngo10328ORF40P |
| 45 | 184 aa hypothetical protein | |||
| 1525 | phenylalanine--tRNA ligase subunit alpha | |||
| 1530 | V | V.NgoWSORF391P (100% identity) | V.Ngo10328ORF1535P | |
| ??? | M | M.NgoWSORF391P (100% identity) | CCGG | M.Ngo10328ORF1535P |
| 1545 | R | Ngo9399ORF1545P (100% identity) | CCGG | Ngo10328ORF1535P |
| 1550 | phenylalanine--tRNA ligase subunit beta | |||
| 1820 | N-6 DNA methylase | |||
| 1825 | S | S.NgoFA19ORF100P (100% identity) | GACNNNNNTGA | S.Ngo10328ORF1825P |
| 1830 | 140 aa hypothetical protein | |||
| 1850 | uroporphyrinogen decarboxylase | |||
| 1855 | H | H.Ngos1291ORF7560P (100% identity) | H.Ngo10328ORF1865P | |
| 1860 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo10328ORF1865P |
| 1865 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo10328ORF1865P |
| 1870 | DNA repair protein RadA | |||
| 3420 | 3-isopropylmalate dehydrogenase | |||
| 3425 | R | Ngos1291ORF9120P (100% identity) | GGNNCC | Ngo10328ORF3430P |
| 3430 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo10328ORF3430P |
| 3435 | 3-isopropylmalate dehydratase small subunit | |||
| 4715 | anthranilate synthase component I | |||
| 4720 | M | M.NgoWLORF1156P (100% identity) | GCCGGC | M.Ngo10328ORF4720P |
| 4725 | R | NgoFQ01ORF4235P (100% identity) | GCCGGC | Ngo10328ORF4720P |
| 4730 | 5-(carboxyamino)imidazole ribonucleotide | |||
| 5965 | replication initiation factor domain-containing | |||
| 5970 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo10328ORF5985P | |
| ??? | R | NgoWSORF1801P (100% identity) | CCGG | Ngo10328ORF5985P |
| ??? | M | M.NgoSH240ORFLP (100% identity) | CCGG | M.Ngo10328ORF5985P |
| 5995 | 48 aa hypothetical protein | |||
| 9420 | FUSC family protein | |||
| ??? | R | NgoWFORF2088P (100% identity) | GGCC | Ngo10328ORF9435P |
| 9435 | M | M.Ngo9112ORF10980P (100% identity) | GGCC | M.Ngo10328ORF9435P |
| 9440 | ribosome recycling factor | |||
| 9960 | IS5/IS1182 family transposase | |||
| 9965 | R | NgoWSIIIP (100% identity) | GGTGA | Ngo10328ORF9970P |
| 9970 | M | M1.NgoFA19I (100% identity) | GGTGA | M1.Ngo10328ORF9970P |
| 9975 | M | M1.NgoWSIII (100% identity) | GGTGA | M2.Ngo10328ORF9970P |
| 9980 | RNA-binding transcriptional accessory protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2775 | peptidylprolyl isomerase | |||
| 2780 | M | M.NgoHL122ORF2795P (100% identity) | M.Ngo10328ORF2780P | |
| 2785 | R | Ngos1291ORF8455P (100% identity) | Ngo10328ORF2780P | |
| 2790 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
| 3240 | alpha-hydroxy-acid oxidizing protein | |||
| 3245 | R | NgoFA19ORF379P (100% identity) | ACACC | Ngo10328ORF3250P |
| 3250 | M | M.Ngo9399ORF5165P (100% identity) | ACACC | M.Ngo10328ORF3250P |
| 3255 | tRNA pseudouridine(55) synthase TruB | |||