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Putative Neisseria gonorrhoeae 10720 RM systems
Ref: Shaskolskiy,B. and Kandinov,I. unpublished
REBASE ref # 35250
Complete sequence: 2,219,837 bp
GenBank #: CP098466
REBASE acronym: Ngo10720
Org_num: 61762
All begin NC852_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
2055 | ADP-glyceromanno-heptose 6-epimerase | |||
2060 | M | M.NgoFA19ORF148P (100% identity) | M.Ngo10720ORF2060P | |
2065 | DNA damage-inducible protein D | |||
2070 | S | S1.NgoWSII (100% identity) | GCANNNNNNNNTGC | S1.Ngo10720ORF2060P |
2075 | S | S2.NgoN160ORF2075P (100% identity) | GCANNNNNNNNTGC | S2.Ngo10720ORF2060P |
2080 | R | Ngo9399ORF2075P (100% identity) | Ngo10720ORF2060P | |
2085 | ATP-dependent Clp protease ATP-binding subunit | |||
3545 | replication-associated recombination protein A | |||
3550 | R | NgoPID1ORF461P (99% identity) | GAGNNNNNTAC | Ngo10720ORF3575P |
3555 | hydroxyacid dehydrogenase | |||
3560 | S | S.Ngos1291I (100% identity) | GAGNNNNNTAC | S.Ngo10720ORF3575P |
3565 | 186 aa hypothetical protein | |||
3570 | 280 aa hypothetical protein | |||
3575 | M | M.NgoPID1ORF461P (100% identity) | GAGNNNNNTAC | M.Ngo10720ORF3575P |
3580 | ABC transporter | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
30 | leucine--tRNA ligase | |||
35 | R | Ngos1291ORF5750P (100% identity) | GATC | Ngo10720ORF40P |
??? | M | M.NgoWSORF8P (100% identity) | GATC | M.Ngo10720ORF40P |
45 | 184 aa hypothetical protein | |||
1530 | phenylalanine--tRNA ligase subunit alpha | |||
1535 | V | V.NgoWSORF391P (100% identity) | V.Ngo10720ORF1540P | |
??? | M | M.NgoWSORF391P (100% identity) | CCGG | M.Ngo10720ORF1540P |
1550 | R | Ngo9399ORF1545P (100% identity) | CCGG | Ngo10720ORF1540P |
1555 | phenylalanine--tRNA ligase subunit beta | |||
1825 | N-6 DNA methylase | |||
1830 | S | S.NgoFA19ORF100P (100% identity) | GACNNNNNTGA | S.Ngo10720ORF1830P |
1835 | 140 aa hypothetical protein | |||
1855 | uroporphyrinogen decarboxylase | |||
1860 | H | H.Ngos1291ORF7560P (100% identity) | H.Ngo10720ORF1870P | |
1865 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo10720ORF1870P |
1870 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo10720ORF1870P |
1875 | DNA repair protein RadA | |||
3440 | 3-isopropylmalate dehydrogenase | |||
3445 | R | Ngos1291ORF9120P (100% identity) | GGNNCC | Ngo10720ORF3450P |
3450 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo10720ORF3450P |
3455 | 3-isopropylmalate dehydratase small subunit | |||
4735 | anthranilate synthase component I | |||
4740 | M | M.NgoWLORF1156P (100% identity) | GCCGGC | M.Ngo10720ORF4740P |
4745 | R | NgoFQ01ORF4235P (100% identity) | GCCGGC | Ngo10720ORF4740P |
4750 | 5-(carboxyamino)imidazole ribonucleotide | |||
6035 | replication initiation factor domain-containing | |||
6040 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo10720ORF6055P | |
??? | R | NgoWSORF1801P (100% identity) | CCGG | Ngo10720ORF6055P |
??? | M | M.NgoSH240ORFLP (100% identity) | CCGG | M.Ngo10720ORF6055P |
6065 | 48 aa hypothetical protein | |||
9485 | FUSC family protein | |||
??? | R | NgoWFORF2088P (100% identity) | GGCC | Ngo10720ORF9500P |
9500 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.Ngo10720ORF9500P |
9505 | ribosome recycling factor | |||
10025 | IS5/IS1182 family transposase | |||
10030 | R | NgoWSIIIP (100% identity) | GGTGA | Ngo10720ORF10035P |
10035 | M | M1.NgoFA19I (100% identity) | GGTGA | M1.Ngo10720ORF10035P |
10040 | M | M1.NgoWSIII (100% identity) | GGTGA | M2.Ngo10720ORF10035P |
10045 | RNA-binding transcriptional accessory protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
2790 | peptidylprolyl isomerase | |||
2795 | M | M.NgoHL122ORF2795P (100% identity) | M.Ngo10720ORF2795P | |
2800 | R | Ngos1291ORF8455P (100% identity) | Ngo10720ORF2795P | |
2805 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
3255 | alpha-hydroxy-acid oxidizing protein | |||
3260 | R | NgoFA19ORF379P (100% identity) | ACACC | Ngo10720ORF3265P |
3265 | M | M.Ngo9399ORF5165P (100% identity) | ACACC | M.Ngo10720ORF3265P |
3275 | tRNA pseudouridine(55) synthase TruB |