Ligilactobacillus ruminis ATCC 25644 |
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Putative Ligilactobacillus ruminis ATCC 25644 RM systems
Ref: Cheng,A.G. et al. unpublished
REBASE ref # 35114
Complete sequence: 2,187,892 bp
GenBank #: CP102284
REBASE acronym: Lru25644
Org_num: 61691
All begin NQ504_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6570 | RNA-guided endonuclease TnpB family protein | |||
| 6575 | S | S.Fcf1255ORF515P (44% identity) | S2.Lru25644ORF6590P | |
| 6580 | site-specific integrase | |||
| 6585 | S | S.Lru881ORF4200P (48% identity) | S1.Lru25644ORF6590P | |
| 6590 | M | M.Lru881ORF4120P (99% identity) | M.Lru25644ORF6590P | |
| 6595 | R | Lru881ORF4120P (99% identity) | Lru25644ORF6590P | |
| 6600 | nucleoside hydrolase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2905 | helix-turn-helix domain-containing protein | |||
| 2910 | M | M.AkuB104JORF10590P (99% identity) | M.Lru25644ORF2910P | |
| 2915 | R | AkuB104JORF10590P (90% identity) | Lru25644ORF2910P | |
| 2920 | DUF2513 domain-containing protein | |||
| 3010 | helix-turn-helix transcriptional regulator | |||
| 3015 | M | M2.AkuB507JORF10220P (59% identity) | M.Lru25644ORF3015P | |
| 3020 | 78 aa hypothetical protein | |||
| 6045 | transposase domain-containing protein | |||
| 6050 | RM | Lru881ORF4660P (98% identity) | Lru25644ORF6055P | |
| 6055 | M | Slu8738ORF990P (10% identity) | M1.Lru25644ORF6055P | |
| 6060 | M | Lru211ORF337P (91% identity) | M2.Lru25644ORF6055P | |
| 6065 | Cof-type HAD-IIB family hydrolase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9820 | GH36 C-terminal domain-containing protein | |||
| 9825 | R | Lru211ORF878P (97% identity) | Lru25644ORF9830P | |
| 9830 | M | M.Lru211ORF878P (96% identity) | M.Lru25644ORF9830P | |
| 9835 | peptide ABC transporter substrate-binding | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3260 | (deoxy)nucleoside triphosphate | |||
| 3265 | R | LruORFAP (100% identity) | Lru25644ORF3265P | |
| 3270 | YccF domain-containing protein | |||