Collinsella stercoris DSM 13279 |
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Putative Collinsella stercoris DSM 13279 RM systems
Ref: Cheng,A.G. et al. unpublished
REBASE ref # 35114
Complete sequence: 2,460,746 bp
GenBank #: CP102276
REBASE acronym: Cst13279a
Org_num: 61409
All begin NQ498_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6180 | Fic family protein | |||
| ??? | S | S2.Bmy100916ORF1249P (13% identity) | S1.Cst13279aORF6195P | |
| 6195 | M | M.Cst13279ORF5815P (100% identity) | M.Cst13279aORF6195P | |
| 6200 | S | S1.Cst13279ORF5815P (100% identity) | S2.Cst13279aORF6195P | |
| 6205 | S | S2.Cst13279ORF5815P (100% identity) | S3.Cst13279aORF6195P | |
| 6210 | S | S3.Cst13279ORF5815P (100% identity) | S4.Cst13279aORF6195P | |
| 6215 | site-specific integrase | |||
| 6220 | S | S4.Cst13279ORF5815P (100% identity) | S5.Cst13279aORF6195P | |
| 6225 | R | Cst13279ORF5815P (98% identity) | Cst13279aORF6195P | |
| 6230 | type II toxin-antitoxin system RelE/ParE family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 185 | BREX system P-loop protein BrxC | |||
| 190 | RM | Cst13279ORF1330AP (100% identity) | Cst13279aORF190AP | |
| 195 | IS1595 family transposase | |||
| 200 | 69 aa hypothetical protein | |||
| 205 | DUF3800 domain-containing protein | |||
| 210 | RM | Cst13279ORF1330BP (100% identity) | Cst13279aORF190BP | |
| 215 | BREX-1 system phosphatase PglZ type A | |||
| 1890 | 370 aa hypothetical protein | |||
| 1895 | R | Cst13279ORF10130P (100% identity) | Cst13279aORF1900P | |
| 1900 | M | M.Cst13279ORF10130P (100% identity) | M.Cst13279aORF1900P | |
| 1905 | family 20 glycosylhydrolase | |||
| 2675 | phosphodiesterase | |||
| 2680 | R | CstDORF903P (100% identity) | CCWGG | Cst13279aORF2685P |
| 2685 | M | M.CstDORF903P (81% identity) | M.Cst13279aORF2685P | |
| 2690 | helix-turn-helix domain-containing protein | |||
| 4370 | 84 aa hypothetical protein | |||
| 4375 | M | M.Cst13279ORF7645P (100% identity) | M.Cst13279aORF4375P | |
| 4380 | 45 aa hypothetical protein | |||
| 5895 | DNA-3-methyladenine glycosylase | |||
| 5900 | M | M1.CstDORF413P (91% identity) | M1.Cst13279aORF5900P | |
| 5905 | M | M2.CstDORF413P (100% identity) | GGTCTC | M2.Cst13279aORF5900P |
| 5910 | R | Cst13279ORF6100P (100% identity) | GGTCTC | Cst13279aORF5900P |
| 5915 | 136 aa hypothetical protein | |||