[Bacteroides] pectinophilus ATCC 43243 |
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Putative [Bacteroides] pectinophilus ATCC 43243 RM systems
Ref: Cheng,A.G. et al. unpublished
REBASE ref # 35114
Complete sequence: 3,078,488 bp
GenBank #: CP102260
REBASE acronym: Bpes43243
Org_num: 61191
All begin NQ488_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 11655 | Mrr restriction system protein | |||
| 11660 | R | RtoL2ORF30870P (99% identity) | Bpes43243ORF11690P | |
| 11665 | 290 aa hypothetical protein | |||
| 11670 | S | S2.Efa2332ORF5510P (100% identity) | S3.Bpes43243ORF11690P | |
| 11675 | S | S3.Efa281ORF4040P (44% identity) | S2.Bpes43243ORF11690P | |
| 11680 | tyrosine-type recombinase/integrase | |||
| 11685 | S | S3.RspA76ORFGP (77% identity) | S1.Bpes43243ORF11690P | |
| 11690 | M | M.Efa281ORF4040P (99% identity) | M.Bpes43243ORF11690P | |
| 11695 | C | C.RtoL2ORF30870P (100% identity) | C.Bpes43243ORF11690P | |
| 11700 | 71 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2565 | helix-turn-helix transcriptional regulator | |||
| 2570 | M | M.Cne1787ORF874P (99% identity) | M.Bpes43243ORF2570P | |
| 2575 | R | PmeBin277ORFCP (96% identity) | Bpes43243ORF2570P | |
| 2580 | site-specific DNA-methyltransferase | |||
| 3655 | 210 aa hypothetical protein | |||
| 3660 | C | C.Bpe43243ORF3116P (100% identity) | C.Bpes43243ORF3665P | |
| 3665 | M | M.Bpe43243ORF3116P (100% identity) | GGNCC | M.Bpes43243ORF3665P |
| 3670 | R | EreMORF19990P (94% identity) | GGNCC | Bpes43243ORF3665P |
| 3675 | TIR domain-containing protein | |||
| 9495 | 260 aa hypothetical protein | |||
| 9500 | M | M2.PmeBin64ORFAP (100% identity) | M1.Bpes43243ORF9500P | |
| 9505 | M | M1.RspP328ORFEP (100% identity) | M2.Bpes43243ORF9500P | |
| 9510 | RNA polymerase subunit sigma-70 | |||
| 9665 | 290 aa hypothetical protein | |||
| 9670 | M | M.RtoHMORF433P (99% identity) | M.Bpes43243ORF9670P | |
| 9675 | helix-turn-helix domain-containing protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4510 | 181 aa hypothetical protein | |||
| 4515 | M | M.Lsp705ORF6420P (35% identity) | M.Bpes43243ORF4515P | |
| 4520 | R | PmeBin338ORFCP (85% identity) | Bpes43243ORF4515P | |
| 4525 | PBECR4 domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11650 | DNA methylase | |||
| 11655 | R | RtoL2Mrr2P (97% identity) | Bpes43243MrrP | |
| 11660 | type I restriction endonuclease subunit R | |||